RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CCDC144CPQ8IYA2 1237 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 SLC12A7Q9Y666 1083 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CPS1P31327 1500 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 ALDH1A1P00352 501 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 TNNT3P45378 269 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 SPICE1Q8N0Z3 855 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 FAM212AQ96EL1 285 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 ZNF830Q96NB3 372 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 AATKQ6ZMQ8 1374 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 NR1I2O75469 434 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CALM1P0DP23 149 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CALM2P0DP24 149 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CALM3P0DP25 149 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 SDSP20132 328 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 RBM25P49756 843 aaKnown RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CHRNDQ07001 517 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 SYCP1Q15431 976 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 CERKLQ49MI3 558 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 TTC22Q5TAA0 569 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 KIAA1841Q6NSI8 718 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 PODNQ7Z5L7 613 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 PLEKHM2Q8IWE5 1019 aa7.55□□□□□ -1.2
NEDD9-202ENST00000379446 UPF3BQ9BZI7 483 aaKnown RBP7.55□□□□□ -1.2
NEDD9-202ENST00000379446 MYO3BQ8WXR4 1341 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
NEDD9-202ENST00000379446 SNX21Q969T3 373 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 ZNF341Q9BYN7 854 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-202ENST00000379446 IL13P35225 146 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 PDE4DQ08499 809 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 USH1GQ495M9 461 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 CCDC117Q8IWD4 279 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-202ENST00000379446 NLGN2Q8NFZ4 835 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 ESR2Q92731 530 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 SSH2Q76I76 1423 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 CFBP00751 764 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 CYP4F22Q6NT55 531 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 RPAP2Q8IXW5 612 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-202ENST00000379446 ZNF592Q92610 1267 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 CAPNS2Q96L46 248 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 COA1Q9GZY4 146 aa7.54□□□□□ -1.2
NEDD9-202ENST00000379446 CCDC196A0A1B0GTZ2 297 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 EYA2O00167 538 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 PRDM1O75626 825 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 GDF11O95390 407 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SCARF1Q14162 830 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 PRR5LQ6MZQ0 368 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 ANKRD20A12PQ8NF67 263 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 CCDC12Q8WUD4 166 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 LPIN2Q92539 896 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 ARHGAP45Q92619 1136 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 ERO1AQ96HE7 468 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 CHAMP1Q96JM3 812 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SMC3Q9UQE7 1217 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 ERICH4A6NGS2 130 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 POTEB2H3BUK9 544 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 GSPT1P15170 499 aaKnown RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 BTDP43251 543 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SUSD4Q5VX71 490 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 RSPH3Q86UC2 560 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SIRT2Q8IXJ6 389 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 KLHDC4Q8TBB5 520 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 PARK7Q99497 189 aaKnown RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 C6orf50Q9HD87 102 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 POLIQ9UNA4 740 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 CEP152O94986 1710 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 MYO9BQ13459 2157 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 USP14P54578 494 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 FCGRTP55899 365 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 IGBP1P78318 339 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SPP2Q13103 211 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SNAPC2Q13487 334 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 TMEM67Q5HYA8 995 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 RAB11FIP4Q86YS3 637 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 CHURC1Q8WUH1 139 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 LARP6Q9BRS8 491 aaKnown RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 TRPC6Q9Y210 931 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 ATP11BQ9Y2G3 1177 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 EVI5O60447 810 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 IFIT1BQ5T764 474 aaKnown RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 FASTKD5Q7L8L6 764 aaKnown RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 HEATR3Q7Z4Q2 680 aa7.53□□□□□ -1.2
NEDD9-202ENST00000379446 ZBTB38Q8NAP3 1195 aaPredicted RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 HOOK1Q9UJC3 728 aaKnown RBP7.53□□□□□ -1.2
NEDD9-202ENST00000379446 SOX10P56693 466 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 ABCB5Q2M3G0 1257 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 UTP14CQ5TAP6 766 aaKnown RBP7.52□□□□□ -1.21
NEDD9-202ENST00000379446 ELMSAN1Q6PJG2 1045 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 G2E3Q7L622 706 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 METTL13Q8N6R0 699 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 ANKRD44Q8N8A2 993 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 BICD2Q8TD16 824 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 NACA2Q9H009 215 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 PTCH1Q13635 1447 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 SYCE3A1L190 88 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 CDKL5O76039 1030 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 HARSP12081 509 aaKnown RBP7.52□□□□□ -1.21
NEDD9-202ENST00000379446 ICA1Q05084 483 aa7.52□□□□□ -1.21
NEDD9-202ENST00000379446 CEP85Q6P2H3 762 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 917.1 ms