RNA–Protein interactions for RNA: ENST00000377465.5

SEC23B-203, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-203ENST00000377465 PPEF1O14829 653 aaPredicted RBP12.72□□□□□ -0.37
SEC23B-203ENST00000377465 BCAMP50895 628 aa12.72□□□□□ -0.37
SEC23B-203ENST00000377465 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
SEC23B-203ENST00000377465 GPSM2P81274 684 aa12.72□□□□□ -0.37
SEC23B-203ENST00000377465 KIAA2012Q0VF49 1180 aa12.72□□□□□ -0.37
SEC23B-203ENST00000377465 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
SEC23B-203ENST00000377465 NDUFB9Q9Y6M9 179 aa12.72□□□□□ -0.37
SEC23B-203ENST00000377465 DICER1Q9UPY3 1922 aaKnown RBP12.72□□□□□ -0.37
SEC23B-203ENST00000377465 PCP11498 1178 aaKnown RBP12.71□□□□□ -0.37
SEC23B-203ENST00000377465 HIBADHP31937 336 aaKnown RBP12.71□□□□□ -0.37
SEC23B-203ENST00000377465 EXOSC10Q01780 885 aaKnown RBP12.71□□□□□ -0.37
SEC23B-203ENST00000377465 EN1Q05925 392 aaPredicted RBP12.71□□□□□ -0.37
SEC23B-203ENST00000377465 STRBPQ96SI9 672 aaKnown RBP12.71□□□□□ -0.37
SEC23B-203ENST00000377465 MRIQ9BWK5 157 aa12.71□□□□□ -0.37
SEC23B-203ENST00000377465 KCNJ4P48050 445 aa12.71□□□□□ -0.37
SEC23B-203ENST00000377465 MMP10P09238 476 aa12.71□□□□□ -0.38
SEC23B-203ENST00000377465 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.38
SEC23B-203ENST00000377465 RPS6KB1P23443 525 aa12.71□□□□□ -0.38
SEC23B-203ENST00000377465 ANKRD1Q15327 319 aa12.71□□□□□ -0.38
SEC23B-203ENST00000377465 ZSCAN23Q3MJ62 389 aa12.71□□□□□ -0.38
SEC23B-203ENST00000377465 PDCL2Q8N4E4 241 aa12.71□□□□□ -0.38
SEC23B-203ENST00000377465 ZSCAN31Q96LW9 406 aaPredicted RBP12.71□□□□□ -0.38
SEC23B-203ENST00000377465 RIOK1Q9BRS2 568 aaKnown RBP12.71□□□□□ -0.38
SEC23B-203ENST00000377465 KIF3AQ9Y496 699 aa12.71□□□□□ -0.38
SEC23B-203ENST00000377465 FAM177BA6PVY3 158 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 PKP1Q13835 747 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 ZNF804AQ7Z570 1209 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 WDR66Q8TBY9 1149 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 PUS7LQ9H0K6 701 aaKnown RBP12.7□□□□□ -0.38
SEC23B-203ENST00000377465 SH2B1Q9NRF2 756 aaPredicted RBP12.7□□□□□ -0.38
SEC23B-203ENST00000377465 ZNF532Q9HCE3 1301 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 PPP4CP60510 307 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 SPTY2D1Q68D10 685 aaPredicted RBP12.7□□□□□ -0.38
SEC23B-203ENST00000377465 ZNF384Q8TF68 577 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 SECISBP2LQ93073 1101 aaKnown RBP12.7□□□□□ -0.38
SEC23B-203ENST00000377465 SIPA1L1O43166 1804 aa12.7□□□□□ -0.38
SEC23B-203ENST00000377465 CYP21A2P08686 494 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
SEC23B-203ENST00000377465 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 GAKO14976 1311 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 PATL2C9JE40 543 aaKnown RBP12.69□□□□□ -0.38
SEC23B-203ENST00000377465 GPAA1O43292 621 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 MAPK8IP2Q13387 824 aaPredicted RBP12.69□□□□□ -0.38
SEC23B-203ENST00000377465 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
SEC23B-203ENST00000377465 COA1Q9GZY4 146 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
SEC23B-203ENST00000377465 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEC23B-203ENST00000377465 CPA1P15085 419 aa12.68□□□□□ -0.38
SEC23B-203ENST00000377465 CAVIN1Q6NZI2 390 aaKnown RBP12.68□□□□□ -0.38
SEC23B-203ENST00000377465 PI16Q6UXB8 463 aa12.68□□□□□ -0.38
SEC23B-203ENST00000377465 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
SEC23B-203ENST00000377465 MYH1P12882 1939 aa12.68□□□□□ -0.38
SEC23B-203ENST00000377465 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
SEC23B-203ENST00000377465 SF3B2Q13435 895 aaKnown RBP12.68□□□□□ -0.38
SEC23B-203ENST00000377465 SLC9C2Q5TAH2 1124 aa12.68□□□□□ -0.38
SEC23B-203ENST00000377465 PRPF40BQ6NWY9 871 aaKnown RBP12.68□□□□□ -0.38
SEC23B-203ENST00000377465 TBC1D22AQ8WUA7 517 aa12.68□□□□□ -0.38
SEC23B-203ENST00000377465 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
SEC23B-203ENST00000377465 GYG1P46976 350 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 RCAN1P53805 252 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 SBK1Q52WX2 424 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 MKRN1Q9UHC7 482 aaKnown RBP12.67□□□□□ -0.38
SEC23B-203ENST00000377465 CYP46A1Q9Y6A2 500 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 KLRK1P26718 216 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 ADCK5Q3MIX3 580 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 POLLQ9UGP5 575 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 ADAMTSL1Q8N6G6 1762 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 U2AF2P26368 475 aaKnown RBP eCLIP12.67□□□□□ -0.387e-8■■□□□ 12.2
SEC23B-203ENST00000377465 MMP14P50281 582 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 TGFB2P61812 414 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 MB21D2Q8IYB1 491 aaPredicted RBP12.67□□□□□ -0.38
SEC23B-203ENST00000377465 FEZ1Q99689 392 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 LIMCH1Q9UPQ0 1083 aa12.67□□□□□ -0.38
SEC23B-203ENST00000377465 BAZ2AQ9UIF9 1905 aaKnown RBP12.66□□□□□ -0.38
SEC23B-203ENST00000377465 STOX1Q6ZVD7 989 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 STAG1Q8WVM7 1258 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 TMX3Q96JJ7 454 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 PSMD1Q99460 953 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 CD209Q9NNX6 404 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 GABPB1Q06547 395 aaPredicted RBP12.66□□□□□ -0.38
SEC23B-203ENST00000377465 TOB2Q14106 344 aaPredicted RBP12.66□□□□□ -0.38
SEC23B-203ENST00000377465 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 MCTP1Q6DN14 999 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.66□□□□□ -0.38
SEC23B-203ENST00000377465 GSG1L2A8MUP6 293 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 KCNA3P22001 575 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 BRD2P25440 801 aaKnown RBP12.66□□□□□ -0.38
SEC23B-203ENST00000377465 GSTO1P78417 241 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 CCDC129Q6ZRS4 1044 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 NEK1Q96PY6 1258 aa12.66□□□□□ -0.38
SEC23B-203ENST00000377465 CCDC66A2RUB6 948 aa12.65□□□□□ -0.38
SEC23B-203ENST00000377465 FGAP02671 866 aa12.65□□□□□ -0.38
SEC23B-203ENST00000377465 CHGBP05060 677 aa12.65□□□□□ -0.38
SEC23B-203ENST00000377465 TXNRD3Q86VQ6 643 aa12.65□□□□□ -0.38
SEC23B-203ENST00000377465 CHMP4CQ96CF2 233 aa12.65□□□□□ -0.38
SEC23B-203ENST00000377465 EPB41L4AQ9HCS5 686 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms