RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 CTNNBL1Q8WYA6 563 aaPredicted RBP20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 ARHGAP31Q2M1Z3 1444 aa20.28■□□□□ 0.84
CLSTN1-202ENST00000377298 MACROD2A1Z1Q3 448 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 CTNNA2P26232 953 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 SNW1Q13573 536 aaKnown RBP20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 PRDM1O75626 825 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 MMRN2Q9H8L6 949 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 ANKARQ7Z5J8 1434 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 PRR36Q9H6K5 1346 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 TSPOAP1O95153 1857 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 PHACTR2O75167 634 aa20.27■□□□□ 0.84
CLSTN1-202ENST00000377298 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.83
CLSTN1-202ENST00000377298 RNF123Q5XPI4 1314 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 NIM1KQ8IY84 436 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 TCHPQ9BT92 498 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 ARAP3Q8WWN8 1544 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 KIF1BO60333 1816 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 TYRO3Q06418 890 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 TAOK3Q9H2K8 898 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 LETM2Q2VYF4 491 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 GSTTP1A0A1W2PQM5 241 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 LZTS2Q9BRK4 669 aa20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 V9GY48 417 aaPredicted RBP20.26■□□□□ 0.83
CLSTN1-202ENST00000377298 PLCD1P51178 756 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 ERBB3P21860 1342 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 KIAA0754O94854 1291 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 NCBP1Q09161 790 aaKnown RBP20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 IMPG2Q9BZV3 1241 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 EZRP15311 586 aaKnown RBP20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 ATP2B4P23634 1241 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 TAF3Q5VWG9 929 aa20.25■□□□□ 0.83
CLSTN1-202ENST00000377298 ELP1O95163 1332 aa20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 NDUFB9Q9Y6M9 179 aa20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 HOOK3Q86VS8 718 aa20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 QTRT2Q9H974 415 aaKnown RBP20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 ZNF174Q15697 407 aa20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 NLGN1Q8N2Q7 840 aa20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 TM6SF1Q9BZW5 370 aa20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 ARPP21Q9UBL0 812 aaPredicted RBP20.24■□□□□ 0.83
CLSTN1-202ENST00000377298 HSPA4P34932 840 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 VWA3AA6NCI4 1184 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 PPP1R2P41236 205 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 BACH1O14867 736 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 PPIP5K2O43314 1243 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 GNG11P61952 73 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 DLGAP5Q15398 846 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 PLVAPQ9BX97 442 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 SLC1A4P43007 532 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 MAPKAPK5Q8IW41 473 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 ASAP1Q9ULH1 1129 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 TET3O43151 1660 aa20.23■□□□□ 0.83
CLSTN1-202ENST00000377298 CTDSPL2Q05D32 466 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 HSP90AA4PQ58FG1 418 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 GIGYF2Q6Y7W6 1299 aaKnown RBP20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 FAM160A1Q05DH4 1040 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 SV2BQ7L1I2 683 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 EAF2Q96CJ1 260 aaPredicted RBP20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 PRPF4BQ13523 1007 aaKnown RBP20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 MFSD14BQ5SR56 506 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 GOLGA6L7A0A1B0GV03 622 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 AKNAD1Q5T1N1 836 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 ANO1Q5XXA6 986 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 TGFBRAP1Q8WUH2 860 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 COPRSQ9NQ92 184 aa20.22■□□□□ 0.83
CLSTN1-202ENST00000377298 CCDC65Q8IXS2 484 aa20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 DIS3L2Q8IYB7 885 aaKnown RBP20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 PPM1FP49593 454 aaPredicted RBP20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 TEKT1Q969V4 418 aa20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 CCDC97Q96F63 343 aaPredicted RBP20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 NCOA5Q9HCD5 579 aaKnown RBP20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 GTF2IP78347 998 aa20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 JADE2Q9NQC1 790 aa20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 FAM196AQ6ZSG2 479 aa20.21■□□□□ 0.83
CLSTN1-202ENST00000377298 CBX1P83916 185 aa20.2■□□□□ 0.83
CLSTN1-202ENST00000377298 IFFO1Q0D2I5 559 aa20.2■□□□□ 0.83
CLSTN1-202ENST00000377298 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.83
CLSTN1-202ENST00000377298 FERMT1Q9BQL6 677 aa20.2■□□□□ 0.83
CLSTN1-202ENST00000377298 SKILP12757 684 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 RPL13P26373 211 aaKnown RBP20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 CA8P35219 290 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 PIK3AP1Q6ZUJ8 805 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 HAUS3Q68CZ6 603 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 CCDC186Q7Z3E2 898 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 FCHSD1Q86WN1 690 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 ERCC6L2Q5T890 1561 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 E7EWF7 191 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 KRT25Q7Z3Z0 450 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 SYNCQ9H7C4 482 aa20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 TTF2Q9UNY4 1162 aaKnown RBP20.2■□□□□ 0.82
CLSTN1-202ENST00000377298 ADCY10Q96PN6 1610 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 TFAP4Q01664 338 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 UBE2Q2Q8WVN8 375 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 HAUS7Q99871 368 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 PPARAQ07869 468 aa20.19■□□□□ 0.82
CLSTN1-202ENST00000377298 CNKSR1Q969H4 720 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms