RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CCL15-CCL14A0A0B4J2E2 113 aa26.09■■□□□ 1.77
VSX1-201ENST00000376707 BCAR3O75815 825 aa26.09■■□□□ 1.77
VSX1-201ENST00000376707 MTX1Q13505 466 aa26.09■■□□□ 1.77
VSX1-201ENST00000376707 CCL15Q16663 113 aa26.09■■□□□ 1.77
VSX1-201ENST00000376707 CCDC102BQ68D86 513 aa26.09■■□□□ 1.77
VSX1-201ENST00000376707 SPDYE5A6NIY4 337 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 HNRNPUQ00839 825 aaKnown RBP eCLIP26.08■■□□□ 1.77
VSX1-201ENST00000376707 CDC42EP5Q6NZY7 148 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 FAM151AQ8WW52 585 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 BRI3BPQ8WY22 251 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 ERO1AQ96HE7 468 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 AKAP2Q9Y2D5 859 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 TRIM17Q9Y577 477 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 SNCAIPQ9Y6H5 919 aa26.08■■□□□ 1.77
VSX1-201ENST00000376707 TIMM10P62072 90 aa26.07■■□□□ 1.76
VSX1-201ENST00000376707 TCP10Q12799 353 aa26.07■■□□□ 1.76
VSX1-201ENST00000376707 ZGPATQ8N5A5 531 aaKnown RBP26.07■■□□□ 1.76
VSX1-201ENST00000376707 ZKSCAN4Q969J2 545 aaPredicted RBP26.07■■□□□ 1.76
VSX1-201ENST00000376707 CLUAP1Q96AJ1 413 aa26.07■■□□□ 1.76
VSX1-201ENST00000376707 TNNQ9UQP3 1299 aa26.07■■□□□ 1.76
VSX1-201ENST00000376707 GNAI2P04899 355 aa26.06■■□□□ 1.76
VSX1-201ENST00000376707 TFCP2Q12800 502 aa26.06■■□□□ 1.76
VSX1-201ENST00000376707 ERO1BQ86YB8 467 aa26.06■■□□□ 1.76
VSX1-201ENST00000376707 ZNF341Q9BYN7 854 aa26.06■■□□□ 1.76
VSX1-201ENST00000376707 USP40Q9NVE5 1235 aa26.06■■□□□ 1.76
VSX1-201ENST00000376707 A0A1B0GUL7 405 aa26.05■■□□□ 1.76
VSX1-201ENST00000376707 ZBTB22O15209 634 aa26.05■■□□□ 1.76
VSX1-201ENST00000376707 RASGRF1Q13972 1273 aa26.05■■□□□ 1.76
VSX1-201ENST00000376707 MIGA2Q7L4E1 593 aa26.05■■□□□ 1.76
VSX1-201ENST00000376707 OTOP1Q7RTM1 612 aa26.05■■□□□ 1.76
VSX1-201ENST00000376707 CD99L2Q8TCZ2 262 aa26.05■■□□□ 1.76
VSX1-201ENST00000376707 SP3Q02447 781 aa26.04■■□□□ 1.76
VSX1-201ENST00000376707 NFIAQ12857 509 aa26.04■■□□□ 1.76
VSX1-201ENST00000376707 MVPQ14764 893 aaKnown RBP26.04■■□□□ 1.76
VSX1-201ENST00000376707 TAF1CQ15572 869 aaPredicted RBP26.04■■□□□ 1.76
VSX1-201ENST00000376707 XAGE2Q96GT9 111 aa26.04■■□□□ 1.76
VSX1-201ENST00000376707 ZFYVE28Q9HCC9 887 aa26.04■■□□□ 1.76
VSX1-201ENST00000376707 ABCF2Q9UG63 623 aa26.04■■□□□ 1.76
VSX1-201ENST00000376707 CETPP11597 493 aa26.03■■□□□ 1.76
VSX1-201ENST00000376707 DZIP1Q86YF9 867 aaKnown RBP26.03■■□□□ 1.76
VSX1-201ENST00000376707 WDHD1O75717 1129 aaPredicted RBP26.02■■□□□ 1.76
VSX1-201ENST00000376707 SNAPC2Q13487 334 aa26.02■■□□□ 1.76
VSX1-201ENST00000376707 ZKSCAN2Q63HK3 967 aa26.02■■□□□ 1.76
VSX1-201ENST00000376707 FAM43AQ8N2R8 423 aa26.02■■□□□ 1.76
VSX1-201ENST00000376707 NEUROD6Q96NK8 337 aa26.02■■□□□ 1.76
VSX1-201ENST00000376707 PDS5AQ29RF7 1337 aaKnown RBP26.02■■□□□ 1.76
VSX1-201ENST00000376707 IRF6O14896 467 aa26.01■■□□□ 1.75
VSX1-201ENST00000376707 PPIL2Q13356 520 aa26.01■■□□□ 1.75
VSX1-201ENST00000376707 SPTY2D1Q68D10 685 aaPredicted RBP26.01■■□□□ 1.75
VSX1-201ENST00000376707 SLF2Q8IX21 1173 aa26.01■■□□□ 1.75
VSX1-201ENST00000376707 EFCC1Q9HA90 598 aa26.01■■□□□ 1.75
VSX1-201ENST00000376707 FAM198AQ9UFP1 575 aa26.01■■□□□ 1.75
VSX1-201ENST00000376707 INPP5BP32019 993 aa26■■□□□ 1.75
VSX1-201ENST00000376707 GORABQ5T7V8 394 aa26■■□□□ 1.75
VSX1-201ENST00000376707 GAKO14976 1311 aa25.99■■□□□ 1.75
VSX1-201ENST00000376707 PNMA6EA0A0J9YXQ4 647 aa25.99■■□□□ 1.75
VSX1-201ENST00000376707 PPATQ06203 517 aa25.99■■□□□ 1.75
VSX1-201ENST00000376707 G3BP1Q13283 466 aaKnown RBP eCLIP25.99■■□□□ 1.75
VSX1-201ENST00000376707 TMEM57Q8N5G2 664 aa25.99■■□□□ 1.75
VSX1-201ENST00000376707 ZBED9Q6R2W3 1325 aa25.98■■□□□ 1.75
VSX1-201ENST00000376707 ZNF112Q9UJU3 913 aa25.98■■□□□ 1.75
VSX1-201ENST00000376707 PTPN22Q9Y2R2 807 aa25.98■■□□□ 1.75
VSX1-201ENST00000376707 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.98■■□□□ 1.75
VSX1-201ENST00000376707 BTBD19C9JJ37 291 aa25.97■■□□□ 1.75
VSX1-201ENST00000376707 RGS3P49796 1198 aa25.97■■□□□ 1.75
VSX1-201ENST00000376707 ARHGEF6Q15052 776 aa25.97■■□□□ 1.75
VSX1-201ENST00000376707 ZFPM1Q8IX07 1006 aa25.97■■□□□ 1.75
VSX1-201ENST00000376707 IDI2Q9BXS1 227 aa25.97■■□□□ 1.75
VSX1-201ENST00000376707 ZCCHC17Q9NP64 241 aaKnown RBP25.97■■□□□ 1.75
VSX1-201ENST00000376707 ENTPD3O75355 529 aa25.96■■□□□ 1.75
VSX1-201ENST00000376707 ERICH6Q7L0X2 663 aa25.96■■□□□ 1.75
VSX1-201ENST00000376707 FAM163AQ96GL9 167 aaPredicted RBP25.96■■□□□ 1.75
VSX1-201ENST00000376707 BTDP43251 543 aa25.95■■□□□ 1.74
VSX1-201ENST00000376707 ZSCAN29Q8IWY8 852 aaPredicted RBP25.95■■□□□ 1.74
VSX1-201ENST00000376707 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.95■■□□□ 1.74
VSX1-201ENST00000376707 HMG20BQ9P0W2 317 aa25.95■■□□□ 1.74
VSX1-201ENST00000376707 MROH7-TTC4A0A0A0MT08 1334 aa25.94■■□□□ 1.74
VSX1-201ENST00000376707 MECOMQ03112 1051 aa25.94■■□□□ 1.74
VSX1-201ENST00000376707 NOL9Q5SY16 702 aaKnown RBP25.94■■□□□ 1.74
VSX1-201ENST00000376707 FTSJ3Q8IY81 847 aaKnown RBP25.94■■□□□ 1.74
VSX1-201ENST00000376707 SPATA5Q8NB90 893 aa25.94■■□□□ 1.74
VSX1-201ENST00000376707 TLR2O60603 784 aa25.93■■□□□ 1.74
VSX1-201ENST00000376707 CAP1Q01518 475 aa25.93■■□□□ 1.74
VSX1-201ENST00000376707 PICALMQ13492 652 aa25.92■■□□□ 1.74
VSX1-201ENST00000376707 PI16Q6UXB8 463 aa25.92■■□□□ 1.74
VSX1-201ENST00000376707 KCNH4Q9UQ05 1017 aa25.92■■□□□ 1.74
VSX1-201ENST00000376707 RFX7Q2KHR2 1363 aa25.92■■□□□ 1.74
VSX1-201ENST00000376707 MYH2Q9UKX2 1941 aa25.92■■□□□ 1.74
VSX1-201ENST00000376707 AK9Q5TCS8 1911 aa25.91■■□□□ 1.74
VSX1-201ENST00000376707 ARID4AP29374 1257 aaPredicted RBP25.91■■□□□ 1.74
VSX1-201ENST00000376707 GSTO1P78417 241 aa25.91■■□□□ 1.74
VSX1-201ENST00000376707 OS9Q13438 667 aaPredicted RBP25.91■■□□□ 1.74
VSX1-201ENST00000376707 ATRNL1Q5VV63 1379 aa25.91■■□□□ 1.74
VSX1-201ENST00000376707 GPR75-ASB3A0A0A6YYF3 556 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 LDHCP07864 332 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 UQCRFS1P1P0C7P4 283 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 POLA2Q14181 598 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 KIF22Q14807 665 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 TBC1D9Q6ZT07 1266 aa25.9■■□□□ 1.74
VSX1-201ENST00000376707 SH3BP5LQ7L8J4 393 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms