RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 ADGRA1Q86SQ6 560 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 EEF2KMTQ96G04 330 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 C16orf45Q96MC5 204 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 CCDC39Q9UFE4 941 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 BTBD18B2RXH4 712 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 AP5Z1O43299 807 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 ANTXR2P58335 489 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 HOMER1Q86YM7 354 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 AK7Q96M32 723 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 CDC5LQ99459 802 aaKnown RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 LMOD1P29536 600 aaPredicted RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 EIF5P55010 431 aaKnown RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 PICALMQ13492 652 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 AOPEPQ8N6M6 819 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 GOLPH3LQ9H4A5 285 aa12.55□□□□□ -0.4
CXCL12-203ENST00000374429 RTCBQ9Y3I0 505 aaKnown RBP12.55□□□□□ -0.4
CXCL12-203ENST00000374429 KIF28PB7ZC32 967 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 PFKFB2O60825 505 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 TRIM37O94972 964 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 WTAPQ15007 396 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 MCM9Q9NXL9 1143 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 VPS54Q9P1Q0 977 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 ANGEL1Q9UNK9 670 aaKnown RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 CPDO75976 1380 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 MAGEB6P1A0A0J9YX57 407 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 FDPSP14324 419 aaKnown RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 USP5P45974 858 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 NDUFA8P51970 172 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 GPIHBP1Q8IV16 184 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 ZNF396Q96N95 335 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 ZFYP08048 801 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 C11orf57Q6ZUT1 292 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 GRAMD1CQ8IYS0 662 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 GNL3LQ9NVN8 582 aaKnown RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 PPP1R1BQ9UD71 204 aaPredicted RBP12.54□□□□□ -0.4
CXCL12-203ENST00000374429 PCDHA7Q9UN72 937 aa12.54□□□□□ -0.4
CXCL12-203ENST00000374429 CSF1RP07333 972 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 CDC25AP30304 524 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 AFMP43652 599 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 GOLGA8FQ08AF8 430 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 GOLGA8DPQ0D2H9 430 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 SART3Q15020 963 aaKnown RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 V9GY48 417 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 CIAO1O76071 339 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 CAMTA2O94983 1202 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 CASP1P29466 404 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 HMGN5P82970 282 aaKnown RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 RESTQ13127 1097 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 TTF1Q15361 905 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 KRT40Q6A162 431 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 CABP5Q9NP86 173 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 TSPY2A6NKD2 308 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 FOXP2O15409 715 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 RPS8P62241 208 aaKnown RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 CLEC17AQ6ZS10 378 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 DYNLL2Q96FJ2 89 aa12.53□□□□□ -0.4
CXCL12-203ENST00000374429 EPB41L4AQ9HCS5 686 aaPredicted RBP12.53□□□□□ -0.4
CXCL12-203ENST00000374429 SPTLC2O15270 562 aa12.52□□□□□ -0.4
CXCL12-203ENST00000374429 UQCRFS1P1P0C7P4 283 aa12.52□□□□□ -0.4
CXCL12-203ENST00000374429 GOLGA8HP0CJ92 632 aa12.52□□□□□ -0.4
CXCL12-203ENST00000374429 SLC44A5Q8NCS7 719 aa12.52□□□□□ -0.4
CXCL12-203ENST00000374429 SPATA31A1Q5TZJ5 1347 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 UQCRHLA0A096LP55 91 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 UQCRHP07919 91 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 ERCC3P19447 782 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
CXCL12-203ENST00000374429 NFIXQ14938 502 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 SAFBQ15424 915 aaKnown RBP eCLIP12.52□□□□□ -0.41
CXCL12-203ENST00000374429 APOA5Q6Q788 366 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.52□□□□□ -0.41
CXCL12-203ENST00000374429 V9GYY5 206 aaPredicted RBP12.52□□□□□ -0.41
CXCL12-203ENST00000374429 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
CXCL12-203ENST00000374429 MAPKAPK5Q8IW41 473 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 MKNK2Q9HBH9 465 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 CLIP2Q9UDT6 1046 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
CXCL12-203ENST00000374429 TRIM22Q8IYM9 498 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 ARHGEF1Q92888 912 aaKnown RBP12.51□□□□□ -0.41
CXCL12-203ENST00000374429 PYCARDQ9ULZ3 195 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 MAPK8IP1Q9UQF2 711 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 ZKSCAN5Q9Y2L8 839 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 STX17P56962 302 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 RTN1Q16799 776 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 TPTE2Q6XPS3 522 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 RASGRP2Q7LDG7 609 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 ZNF34Q8IZ26 560 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
CXCL12-203ENST00000374429 RBM5P52756 815 aaKnown RBP eCLIP12.5□□□□□ -0.41
CXCL12-203ENST00000374429 SLIT3O75094 1523 aa12.5□□□□□ -0.41
CXCL12-203ENST00000374429 RASGRP4Q8TDF6 673 aa12.5□□□□□ -0.41
CXCL12-203ENST00000374429 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms