RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 JAG2Q9Y219 1238 aa18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 FBXO18Q8NFZ0 1043 aa18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
CNKSR1-202ENST00000374253 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 VPS37DQ86XT2 251 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 CCDC82Q8N4S0 544 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 SPC24Q8NBT2 197 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 IGDCC4Q8TDY8 1250 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 ZNF396Q96N95 335 aaPredicted RBP18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 MINPP1Q9UNW1 487 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 MINDY4BA8MYZ0 360 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 IFIT3O14879 490 aaKnown RBP18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 DNAJC25Q9H1X3 360 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 TTC12Q9H892 705 aaPredicted RBP18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 ARAP2Q8WZ64 1704 aa18.66■□□□□ 0.58
CNKSR1-202ENST00000374253 RREB1Q92766 1687 aa18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 VPS72Q15906 364 aa18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 CMTR1Q8N1G2 835 aaKnown RBP18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 GOLGB1Q14789 3259 aaKnown RBP18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 FSIP1Q8NA03 581 aa18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 TFCP2L1Q9NZI6 479 aa18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 PCDHA7Q9UN72 937 aa18.65■□□□□ 0.58
CNKSR1-202ENST00000374253 ZMYM6O95789 1325 aa18.64■□□□□ 0.58
CNKSR1-202ENST00000374253 ZBTB43O43298 467 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 MFSD6Q6ZSS7 791 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 NBPF5PQ86XG9 351 aaPredicted RBP18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 FAM200AQ8TCP9 573 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 ALG1Q9BT22 464 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 CBX8Q9HC52 389 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 USP21Q9UK80 565 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 COL5A3P25940 1745 aaPredicted RBP18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 COL1A1P02452 1464 aaPredicted RBP18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 MYH15Q9Y2K3 1946 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 RTL9Q8NET4 1388 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 CYP2D7A0A087X1C5 515 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 A0A1B0GVL5 298 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 DYNLL1P63167 89 aaKnown RBP18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 AKNAD1Q5T1N1 836 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 SASS6Q6UVJ0 657 aa18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 CCNL1Q9UK58 526 aaPredicted RBP18.64■□□□□ 0.57
CNKSR1-202ENST00000374253 RANBP6O60518 1105 aaKnown RBP18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 C17orf53Q8N3J3 647 aaPredicted RBP18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 NPHP1O15259 732 aa18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 SNW1Q13573 536 aaKnown RBP18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 STK38Q15208 465 aa18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 SF3A1Q15459 793 aaKnown RBP18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 ALX1Q15699 326 aa18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 CCDC73Q6ZRK6 1079 aa18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 BSDC1Q9NW68 430 aaPredicted RBP18.63■□□□□ 0.57
CNKSR1-202ENST00000374253 WDR19Q8NEZ3 1342 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 ZPR1O75312 459 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 FAM84BQ96KN1 310 aaPredicted RBP18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 FAM217BQ9NTX9 383 aaPredicted RBP18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 SLC12A7Q9Y666 1083 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 DOCK2Q92608 1830 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 KIF23Q02241 960 aaPredicted RBP18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 EVX2Q03828 476 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 MYSM1Q5VVJ2 828 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
CNKSR1-202ENST00000374253 CCDC69A6NI79 296 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 CAVIN4Q5BKX8 364 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 RBM43Q6ZSC3 357 aaKnown RBP18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 CHMP4CQ96CF2 233 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 TMEM87BQ96K49 555 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 MAGEB6P1A0A0J9YX57 407 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 PRDM1O75626 825 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 MARCKSP29966 332 aaPredicted RBP18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 CHAF1AQ13111 956 aaPredicted RBP18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 KRT40Q6A162 431 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 LINC00301Q8NCQ3 95 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 ZNF384Q8TF68 577 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 NARFQ9UHQ1 456 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 BCORQ6W2J9 1755 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 C4AP0C0L4 1744 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 C4BP0C0L5 1744 aa18.61■□□□□ 0.57
CNKSR1-202ENST00000374253 CNTNAP4Q9C0A0 1308 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 ZNF165P49910 485 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 SLC4A8Q2Y0W8 1093 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 NUP133Q8WUM0 1156 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 ARHGEF1Q92888 912 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 GNL3LQ9NVN8 582 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 RTEL1Q9NZ71 1219 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 ZNF804BA4D1E1 1349 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 KINO60870 393 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 IARSP41252 1262 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 NDUFA8P51970 172 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 GNL2Q13823 731 aaKnown RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 NTRK3Q16288 839 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 SYNE3Q6ZMZ3 975 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 C11orf57Q6ZUT1 292 aaPredicted RBP18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 NLRP3Q96P20 1036 aa18.6■□□□□ 0.57
CNKSR1-202ENST00000374253 RPS6KA4O75676 772 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms