RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 SMC1AQ14683 1233 aaKnown RBP20.42■□□□□ 0.86
VPS26A-202ENST00000373382 SENP2Q9HC62 589 aa20.42■□□□□ 0.86
VPS26A-202ENST00000373382 EYA2O00167 538 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 FOXO4P98177 505 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 MCM6Q14566 821 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 CHRNA2Q15822 529 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 VSTM4Q8IW00 320 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.41■□□□□ 0.86
VPS26A-202ENST00000373382 EFCAB8A8MWE9 144 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 A1BGP04217 495 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 LMAN1P49257 510 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 FOXP4Q8IVH2 680 aaPredicted RBP20.41■□□□□ 0.86
VPS26A-202ENST00000373382 JMYQ8N9B5 988 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 ARFGAP3Q9NP61 516 aa20.41■□□□□ 0.86
VPS26A-202ENST00000373382 IKBKBO14920 756 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 MTF1Q14872 753 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 KCND1Q9NSA2 647 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
VPS26A-202ENST00000373382 KCNH3Q9ULD8 1083 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 NFE2L3Q9Y4A8 694 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 DHX58Q96C10 678 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 GPAA1O43292 621 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 IDH1O75874 414 aaKnown RBP20.4■□□□□ 0.86
VPS26A-202ENST00000373382 ZRANB2O95218 330 aaKnown RBP eCLIP20.4■□□□□ 0.86
VPS26A-202ENST00000373382 PHKG2P15735 406 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 CCDC57Q2TAC2 916 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 CABLES1Q8TDN4 633 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 PARD6BQ9BYG5 372 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 TRIM34Q9BYJ4 488 aa20.4■□□□□ 0.86
VPS26A-202ENST00000373382 B4E1Z4 1266 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 METTL16Q86W50 562 aaKnown RBP20.39■□□□□ 0.85
VPS26A-202ENST00000373382 NKX2-3Q8TAU0 364 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 PALLDQ8WX93 1383 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 ARHGAP6O43182 974 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 CPLX2Q6PUV4 134 aaKnown RBP20.39■□□□□ 0.85
VPS26A-202ENST00000373382 PLCD3Q8N3E9 789 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 PLBD2Q8NHP8 589 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 XAGE2Q96GT9 111 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 SLC26A6Q9BXS9 759 aa20.39■□□□□ 0.85
VPS26A-202ENST00000373382 RGPD2P0DJD1 1756 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 STX17P56962 302 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 CC2D1AQ6P1N0 951 aaPredicted RBP20.38■□□□□ 0.85
VPS26A-202ENST00000373382 SRRTQ9BXP5 876 aaKnown RBP20.38■□□□□ 0.85
VPS26A-202ENST00000373382 SLIT1O75093 1534 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 TBC1D8O95759 1140 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 CAPN2P17655 700 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 RRP12Q5JTH9 1297 aaKnown RBP20.38■□□□□ 0.85
VPS26A-202ENST00000373382 MB21D2Q8IYB1 491 aaPredicted RBP20.38■□□□□ 0.85
VPS26A-202ENST00000373382 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
VPS26A-202ENST00000373382 GPS2Q13227 327 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 IFNL2Q8IZJ0 200 aa20.38■□□□□ 0.85
VPS26A-202ENST00000373382 CMTR1Q8N1G2 835 aaKnown RBP20.38■□□□□ 0.85
VPS26A-202ENST00000373382 SKIDA1Q1XH10 827 aa20.37■□□□□ 0.85
VPS26A-202ENST00000373382 INTS13Q9NVM9 706 aa20.37■□□□□ 0.85
VPS26A-202ENST00000373382 MED1Q15648 1581 aaPredicted RBP20.37■□□□□ 0.85
VPS26A-202ENST00000373382 KDM3BQ7LBC6 1761 aa20.37■□□□□ 0.85
VPS26A-202ENST00000373382 POLR2DO15514 142 aaKnown RBP20.37■□□□□ 0.85
VPS26A-202ENST00000373382 COBLO75128 1261 aa20.37■□□□□ 0.85
VPS26A-202ENST00000373382 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
VPS26A-202ENST00000373382 GRIN1Q05586 938 aa20.37■□□□□ 0.85
VPS26A-202ENST00000373382 SAMSN1Q9NSI8 373 aaKnown RBP20.37■□□□□ 0.85
VPS26A-202ENST00000373382 KCNJ14Q9UNX9 436 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 FOXP2O15409 715 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 TFRCP02786 760 aaKnown RBP20.36■□□□□ 0.85
VPS26A-202ENST00000373382 TNNT3P45378 269 aaPredicted RBP20.36■□□□□ 0.85
VPS26A-202ENST00000373382 CASP7P55210 303 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 RAD51AP2Q09MP3 1159 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 A0A0U1RQJ8 604 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 BMP6P22004 513 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 FMR1Q06787 632 aaKnown RBP eCLIP20.36■□□□□ 0.851e-8■□□□□ 10
VPS26A-202ENST00000373382 KRT28Q7Z3Y7 464 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 ATRIPQ8WXE1 791 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 LTN1O94822 1766 aa20.36■□□□□ 0.85
VPS26A-202ENST00000373382 RFX7Q2KHR2 1363 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 TUBB4AP04350 444 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 PRR29P0C7W0 189 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 DHX8Q14562 1220 aaKnown RBP20.35■□□□□ 0.85
VPS26A-202ENST00000373382 CYB5R4Q7L1T6 521 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 TUBE1Q9UJT0 475 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 SOWAHDA6NJG2 315 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 GOLGA8AA7E2F4 631 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 PHACTR2O75167 634 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 TPM1P09493 284 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 SLC9C2Q5TAH2 1124 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 WWC2Q6AWC2 1192 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 LRP10Q7Z4F1 713 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
VPS26A-202ENST00000373382 ANGEL1Q9UNK9 670 aaKnown RBP20.35■□□□□ 0.85
VPS26A-202ENST00000373382 BTBD18B2RXH4 712 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 NBPF26B4DH59 902 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 NBPF14Q5TI25 921 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 NBPF10Q6P3W6 841 aaKnown RBP20.34■□□□□ 0.85
VPS26A-202ENST00000373382 C10orf67Q8IYJ2 551 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 NBPF15Q8N660 670 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 ZKSCAN3Q9BRR0 538 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 SERTAD1Q9UHV2 236 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 KCNJ6P48051 423 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 SPECC1LQ69YQ0 1117 aa20.34■□□□□ 0.85
VPS26A-202ENST00000373382 FAM89AQ96GI7 184 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms