RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 ANO1Q5XXA6 986 aa22.19■■□□□ 1.14
LMO4-202ENST00000370544 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
LMO4-202ENST00000370544 GTF2F1P35269 517 aaKnown RBP eCLIP22.18■■□□□ 1.145e-11■■■■□ 24.4
LMO4-202ENST00000370544 PLCD1P51178 756 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 MYL5Q02045 173 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 SRRTQ9BXP5 876 aaKnown RBP22.18■■□□□ 1.14
LMO4-202ENST00000370544 IKBKGQ9Y6K9 419 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 ZFYVE16Q7Z3T8 1539 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 WDR66Q8TBY9 1149 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 HOMER2Q9NSB8 354 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 CLCN1P35523 988 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 PIK3AP1Q6ZUJ8 805 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 CCDC155Q8N6L0 562 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 SPATA5Q8NB90 893 aa22.18■■□□□ 1.14
LMO4-202ENST00000370544 AATFQ9NY61 560 aaKnown RBP eCLIP22.17■■□□□ 1.14
LMO4-202ENST00000370544 MAST3O60307 1309 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 CCDC65Q8IXS2 484 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 V9GY48 417 aaPredicted RBP22.17■■□□□ 1.14
LMO4-202ENST00000370544 ARFGAP3Q9NP61 516 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 NDUFB9Q9Y6M9 179 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 NEO1Q92859 1461 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 PRDM1O75626 825 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 STAMBPO95630 424 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 FAM107BQ9H098 131 aa22.17■■□□□ 1.14
LMO4-202ENST00000370544 FAM98CQ17RN3 349 aaKnown RBP22.16■■□□□ 1.14
LMO4-202ENST00000370544 GIGYF2Q6Y7W6 1299 aaKnown RBP22.16■■□□□ 1.14
LMO4-202ENST00000370544 LUC7L2Q9Y383 392 aaKnown RBP22.16■■□□□ 1.14
LMO4-202ENST00000370544 EIF6P56537 245 aaKnown RBP22.16■■□□□ 1.14
LMO4-202ENST00000370544 CTDSPL2Q05D32 466 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 CERS3Q8IU89 383 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 GUCA1BQ9UMX6 200 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 COMMD10Q9Y6G5 202 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 NEURL1BA8MQ27 555 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 TMEM110-MUSTN1A8MSY1 372 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 SLU7O95391 586 aaKnown RBP22.16■■□□□ 1.14
LMO4-202ENST00000370544 KARSQ15046 597 aaKnown RBP22.16■■□□□ 1.14
LMO4-202ENST00000370544 FAM212AQ96EL1 285 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 CTNND2Q9UQB3 1225 aa22.16■■□□□ 1.14
LMO4-202ENST00000370544 ERVV-2B6SEH9 535 aa22.15■■□□□ 1.14
LMO4-202ENST00000370544 ZAP70P43403 619 aa22.15■■□□□ 1.14
LMO4-202ENST00000370544 LZTFL1Q9NQ48 299 aa22.15■■□□□ 1.14
LMO4-202ENST00000370544 RPL13P26373 211 aaKnown RBP22.15■■□□□ 1.14
LMO4-202ENST00000370544 STK32BQ9NY57 414 aa22.15■■□□□ 1.14
LMO4-202ENST00000370544 BACH1O14867 736 aa22.15■■□□□ 1.14
LMO4-202ENST00000370544 GJC1P36383 396 aa22.15■■□□□ 1.14
LMO4-202ENST00000370544 NCBP1Q09161 790 aaKnown RBP22.15■■□□□ 1.14
LMO4-202ENST00000370544 GCC2Q8IWJ2 1684 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 CCT6AP40227 531 aaKnown RBP22.14■■□□□ 1.14
LMO4-202ENST00000370544 SPECC1LQ69YQ0 1117 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 GOLGA1Q92805 767 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 CALCOCO1Q9P1Z2 691 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 ZNF532Q9HCE3 1301 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 SP4Q02446 784 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 HS1BP3Q53T59 392 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 CNGA4Q8IV77 575 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 VTI1AQ96AJ9 217 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 TSNARE1Q96NA8 513 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 KCNH3Q9ULD8 1083 aa22.14■■□□□ 1.14
LMO4-202ENST00000370544 PPP1R2P41236 205 aa22.14■■□□□ 1.13
LMO4-202ENST00000370544 CCNT1O60563 726 aaKnown RBP22.14■■□□□ 1.13
LMO4-202ENST00000370544 EEF2P13639 858 aaKnown RBP22.14■■□□□ 1.13
LMO4-202ENST00000370544 ARHGEF10LQ9HCE6 1279 aa22.14■■□□□ 1.13
LMO4-202ENST00000370544 ARHGEF5Q12774 1597 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 DIS3L2Q8IYB7 885 aaKnown RBP22.13■■□□□ 1.13
LMO4-202ENST00000370544 PKD2L1Q9P0L9 805 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 SLAIN2Q9P270 581 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 DCAF17Q5H9S7 520 aaPredicted RBP22.13■■□□□ 1.13
LMO4-202ENST00000370544 ABCC4O15439 1325 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 ZNF569Q5MCW4 686 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 AKNAD1Q5T1N1 836 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 CAPZA3Q96KX2 299 aa22.13■■□□□ 1.13
LMO4-202ENST00000370544 KAT6BQ8WYB5 2073 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 DPP8Q6V1X1 898 aaPredicted RBP22.12■■□□□ 1.13
LMO4-202ENST00000370544 IBTKQ9P2D0 1353 aaPredicted RBP22.12■■□□□ 1.13
LMO4-202ENST00000370544 KDRP35968 1356 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 A0A1W2PRG0 241 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 PDE4DQ08499 809 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 KRT222Q8N1A0 295 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 ATP5JP18859 108 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 GRM1Q13255 1194 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 CLSTN2Q9H4D0 955 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 GJA3Q9Y6H8 435 aa22.12■■□□□ 1.13
LMO4-202ENST00000370544 MYL10Q9BUA6 226 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 TRAF5O00463 557 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 HSPA4P34932 840 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 TCIRG1Q13488 830 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 OTUD7BQ6GQQ9 843 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 DPH6Q7L8W6 267 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 AKR1B15C9JRZ8 316 aaPredicted RBP22.11■■□□□ 1.13
LMO4-202ENST00000370544 CUTAO60888 179 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 TTC38Q5R3I4 469 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 FCHSD1Q86WN1 690 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 GIGYF1O75420 1035 aaPredicted RBP22.11■■□□□ 1.13
LMO4-202ENST00000370544 LTKP29376 864 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 RAPGEF1Q13905 1077 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 FRMD4BQ9Y2L6 1034 aa22.11■■□□□ 1.13
LMO4-202ENST00000370544 CCDC24Q8N4L8 307 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 PHKG2P15735 406 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 MCM6Q14566 821 aa22.1■■□□□ 1.13
LMO4-202ENST00000370544 GSTA5Q7RTV2 222 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms