RNA–Protein interactions for RNA: ENST00000369367.7

SCAF11-202, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SCAF11, Length 7,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-202ENST00000369367 TMX3Q96JJ7 454 aa11.16□□□□□ -0.62
SCAF11-202ENST00000369367 TFIP11Q9UBB9 837 aaKnown RBP11.16□□□□□ -0.62
SCAF11-202ENST00000369367 ERVV-1B6SEH8 477 aa11.16□□□□□ -0.62
SCAF11-202ENST00000369367 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
SCAF11-202ENST00000369367 CTNNBL1Q8WYA6 563 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-202ENST00000369367 AATFQ9NY61 560 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCAF11-202ENST00000369367 GPAA1O43292 621 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 RAB11FIP4Q86YS3 637 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 ANGEL1Q9UNK9 670 aaKnown RBP11.15□□□□□ -0.62
SCAF11-202ENST00000369367 ADRA2BP18089 450 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 GPCPD1Q9NPB8 672 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 USP19O94966 1318 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 MAP3K4Q9Y6R4 1608 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 SYCE3A1L190 88 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 PPEF1O14829 653 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-202ENST00000369367 USPL1Q5W0Q7 1092 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 KRT25Q7Z3Z0 450 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 FAM177A1Q8N128 213 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-202ENST00000369367 DALRD3Q5D0E6 543 aaKnown RBP11.15□□□□□ -0.62
SCAF11-202ENST00000369367 LLPHQ9BRT6 129 aaKnown RBP11.15□□□□□ -0.62
SCAF11-202ENST00000369367 MACROD2A1Z1Q3 448 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 SERPINB2P05120 415 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 SPATA31A3Q5VYP0 1347 aa11.15□□□□□ -0.62
SCAF11-202ENST00000369367 TBC1D32Q96NH3 1257 aa11.15□□□□□ -0.63
SCAF11-202ENST00000369367 DBNDD2Q9BQY9 259 aa11.15□□□□□ -0.63
SCAF11-202ENST00000369367 SPTLC2O15270 562 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 RUFY3Q7L099 469 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 ARMC9Q7Z3E5 817 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 PCDHB15Q9Y5E8 787 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 ATP10DQ9P241 1426 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 JCADQ9P266 1359 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 ERBB3P21860 1342 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 CCDC17Q96LX7 622 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 CYLC1P35663 651 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-202ENST00000369367 COMMD10Q9Y6G5 202 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 PTPDC1A2A3K4 754 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 TAF5LO75529 589 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 NT5C2P49902 561 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 BRINP3Q76B58 766 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 SUCLG2Q96I99 432 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 ABCC3O15438 1527 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 CHMLP26374 656 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 GCOM1H8Y6P7 765 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-202ENST00000369367 AKR1B10O60218 316 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 MYZAPP0CAP1 466 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 MCF2L2Q86YR7 1114 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 LRRC2Q9BYS8 371 aa11.14□□□□□ -0.63
SCAF11-202ENST00000369367 TET3O43151 1660 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 GOLGA6L10A0A0M3HER8 536 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 NOP2P46087 812 aaKnown RBP11.13□□□□□ -0.63
SCAF11-202ENST00000369367 STRN3Q13033 797 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 INTS4Q96HW7 963 aaKnown RBP11.13□□□□□ -0.63
SCAF11-202ENST00000369367 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-202ENST00000369367 NPR1P16066 1061 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 ADCY7P51828 1080 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 SKIDA1Q1XH10 827 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 SLC27A3Q5K4L6 730 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 TMED8Q6PL24 325 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-202ENST00000369367 CLEC4GQ6UXB4 293 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 SV2BQ7L1I2 683 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 G2E3Q7L622 706 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 TAX1BP1Q86VP1 789 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 TSNARE1Q96NA8 513 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 IGHDP01880 384 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 HOMER2Q9NSB8 354 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 FRMD4BQ9Y2L6 1034 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 ATP5JP18859 108 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 ZNF165P49910 485 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 ROBO2Q9HCK4 1378 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 UBXN4Q92575 508 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 ZNF804BA4D1E1 1349 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 SPATA31A6Q5VVP1 1343 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
SCAF11-202ENST00000369367 TRIM6Q9C030 488 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-202ENST00000369367 IGSF1Q8N6C5 1336 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 UVSSAQ2YD98 709 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 FCHSD1Q86WN1 690 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 FNBP1Q96RU3 617 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 AFF2P51816 1311 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 TMCO5BA8MYB1 307 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 H0YHG0 523 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 USP14P54578 494 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 PTPN14Q15678 1187 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 LEKR1Q6ZMV7 388 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 CLIP2Q9UDT6 1046 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
SCAF11-202ENST00000369367 NSMFQ6X4W1 530 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 KIF18AQ8NI77 898 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 ZNF594Q96JF6 807 aaPredicted RBP11.12□□□□□ -0.63
SCAF11-202ENST00000369367 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 SWAP70Q9UH65 585 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 CDC42BPGQ6DT37 1551 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 OVOS2A0A0G2JMS6 1433 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 OVOS2A0A0J9YW53 1432 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 TCP10Q12799 353 aa11.12□□□□□ -0.63
SCAF11-202ENST00000369367 OVOS2Q6IE36 1432 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms