RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 FAM151AQ8WW52 585 aa19.95■□□□□ 0.78
CKS1B-202ENST00000368436 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
CKS1B-202ENST00000368436 ZKSCAN4Q969J2 545 aaPredicted RBP19.95■□□□□ 0.78
CKS1B-202ENST00000368436 WRNIP1Q96S55 665 aa19.95■□□□□ 0.78
CKS1B-202ENST00000368436 GNL3LQ9NVN8 582 aaKnown RBP19.95■□□□□ 0.78
CKS1B-202ENST00000368436 AK9Q5TCS8 1911 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 PRDX5P30044 214 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 DIXDC1Q155Q3 683 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 INTS3Q68E01 1043 aaKnown RBP19.94■□□□□ 0.78
CKS1B-202ENST00000368436 CDC42EP5Q6NZY7 148 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 MEIS3Q99687 375 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 ZNF341Q9BYN7 854 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 EFCC1Q9HA90 598 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 ZFYVE28Q9HCC9 887 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 DENND2AQ9ULE3 1009 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 PA2G4Q9UQ80 394 aaKnown RBP19.94■□□□□ 0.78
CKS1B-202ENST00000368436 MYH2Q9UKX2 1941 aa19.94■□□□□ 0.78
CKS1B-202ENST00000368436 LDHBP07195 334 aaKnown RBP19.93■□□□□ 0.78
CKS1B-202ENST00000368436 PHKA1P46020 1223 aa19.93■□□□□ 0.78
CKS1B-202ENST00000368436 TAF1CQ15572 869 aaPredicted RBP19.93■□□□□ 0.78
CKS1B-202ENST00000368436 ZCCHC17Q9NP64 241 aaKnown RBP19.93■□□□□ 0.78
CKS1B-202ENST00000368436 IRF6O14896 467 aa19.92■□□□□ 0.78
CKS1B-202ENST00000368436 CETPP11597 493 aa19.92■□□□□ 0.78
CKS1B-202ENST00000368436 PPIL2Q13356 520 aa19.92■□□□□ 0.78
CKS1B-202ENST00000368436 MIGA2Q7L4E1 593 aa19.92■□□□□ 0.78
CKS1B-202ENST00000368436 ZNF112Q9UJU3 913 aa19.92■□□□□ 0.78
CKS1B-202ENST00000368436 NFIAQ12857 509 aa19.91■□□□□ 0.78
CKS1B-202ENST00000368436 SNAPC2Q13487 334 aa19.91■□□□□ 0.78
CKS1B-202ENST00000368436 PRPF38BQ5VTL8 546 aaKnown RBP19.91■□□□□ 0.78
CKS1B-202ENST00000368436 CCDC102BQ68D86 513 aa19.91■□□□□ 0.78
CKS1B-202ENST00000368436 ARMC5Q96C12 935 aa19.91■□□□□ 0.78
CKS1B-202ENST00000368436 BTBD19C9JJ37 291 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 GNAI3P08754 354 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 ADORA1P30542 326 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 INPP5BP32019 993 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 PPATQ06203 517 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 TCP10Q12799 353 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 MTX1Q13505 466 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 USP40Q9NVE5 1235 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 FAM198AQ9UFP1 575 aa19.9■□□□□ 0.78
CKS1B-202ENST00000368436 TLR2O60603 784 aa19.89■□□□□ 0.77
CKS1B-202ENST00000368436 TIMM10P62072 90 aa19.89■□□□□ 0.77
CKS1B-202ENST00000368436 ARHGEF6Q15052 776 aa19.89■□□□□ 0.77
CKS1B-202ENST00000368436 PDS5AQ29RF7 1337 aaKnown RBP19.89■□□□□ 0.77
CKS1B-202ENST00000368436 DOCK2Q92608 1830 aa19.89■□□□□ 0.77
CKS1B-202ENST00000368436 HTTP42858 3142 aa19.89■□□□□ 0.77
CKS1B-202ENST00000368436 GAKO14976 1311 aa19.88■□□□□ 0.77
CKS1B-202ENST00000368436 POTEFA5A3E0 1075 aa19.88■□□□□ 0.77
CKS1B-202ENST00000368436 WDHD1O75717 1129 aaPredicted RBP19.88■□□□□ 0.77
CKS1B-202ENST00000368436 ZGPATQ8N5A5 531 aaKnown RBP19.88■□□□□ 0.77
CKS1B-202ENST00000368436 ZSWIM8A7E2V4 1837 aa19.88■□□□□ 0.77
CKS1B-202ENST00000368436 SRGAP3O43295 1099 aa19.87■□□□□ 0.77
CKS1B-202ENST00000368436 RASGRF1Q13972 1273 aa19.87■□□□□ 0.77
CKS1B-202ENST00000368436 NOL9Q5SY16 702 aaKnown RBP19.87■□□□□ 0.77
CKS1B-202ENST00000368436 ZFPM1Q8IX07 1006 aa19.87■□□□□ 0.77
CKS1B-202ENST00000368436 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
CKS1B-202ENST00000368436 KCNH4Q9UQ05 1017 aa19.87■□□□□ 0.77
CKS1B-202ENST00000368436 A0A1B0GUL7 405 aa19.86■□□□□ 0.77
CKS1B-202ENST00000368436 TFCP2Q12800 502 aa19.86■□□□□ 0.77
CKS1B-202ENST00000368436 FAM163AQ96GL9 167 aaPredicted RBP19.86■□□□□ 0.77
CKS1B-202ENST00000368436 AKAP2Q9Y2D5 859 aa19.86■□□□□ 0.77
CKS1B-202ENST00000368436 RFX7Q2KHR2 1363 aa19.85■□□□□ 0.77
CKS1B-202ENST00000368436 ATRNL1Q5VV63 1379 aa19.85■□□□□ 0.77
CKS1B-202ENST00000368436 IPO8O15397 1037 aaKnown RBP19.85■□□□□ 0.77
CKS1B-202ENST00000368436 ENTPD3O75355 529 aa19.85■□□□□ 0.77
CKS1B-202ENST00000368436 ANKRD23Q86SG2 305 aa19.85■□□□□ 0.77
CKS1B-202ENST00000368436 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.85■□□□□ 0.77
CKS1B-202ENST00000368436 XAGE2Q96GT9 111 aa19.85■□□□□ 0.77
CKS1B-202ENST00000368436 KIAA0100Q14667 2235 aaKnown RBP19.84■□□□□ 0.77
CKS1B-202ENST00000368436 TRIM27P14373 513 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 RGS3P49796 1198 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 LACTBP83111 547 aaPredicted RBP19.84■□□□□ 0.77
CKS1B-202ENST00000368436 MOGSQ13724 837 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 MVPQ14764 893 aaKnown RBP19.84■□□□□ 0.77
CKS1B-202ENST00000368436 C17orf99Q6UX52 265 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 SLF2Q8IX21 1173 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 ZNF333Q96JL9 665 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 PTCH2Q9Y6C5 1203 aa19.84■□□□□ 0.77
CKS1B-202ENST00000368436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.84■□□□□ 0.77
CKS1B-202ENST00000368436 PHF20L1A8MW92 1017 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 MAP3K10Q02779 954 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 SPTY2D1Q68D10 685 aaPredicted RBP19.83■□□□□ 0.77
CKS1B-202ENST00000368436 ATF7IPQ6VMQ6 1270 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 SH3BP5LQ7L8J4 393 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 DZIP1Q86YF9 867 aaKnown RBP19.83■□□□□ 0.77
CKS1B-202ENST00000368436 ARHGAP39Q9C0H5 1083 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 ABCF2Q9UG63 623 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 TNNQ9UQP3 1299 aa19.83■□□□□ 0.77
CKS1B-202ENST00000368436 PDHXO00330 501 aa19.82■□□□□ 0.76
CKS1B-202ENST00000368436 BCAR3O75815 825 aa19.82■□□□□ 0.76
CKS1B-202ENST00000368436 GNRH1P01148 92 aa19.82■□□□□ 0.76
CKS1B-202ENST00000368436 GNAI2P04899 355 aa19.82■□□□□ 0.76
CKS1B-202ENST00000368436 KIF22Q14807 665 aa19.82■□□□□ 0.76
CKS1B-202ENST00000368436 NBPF11Q86T75 865 aa19.82■□□□□ 0.76
CKS1B-202ENST00000368436 MROH7-TTC4A0A0A0MT08 1334 aa19.81■□□□□ 0.76
CKS1B-202ENST00000368436 ADGRA2Q96PE1 1338 aa19.81■□□□□ 0.76
CKS1B-202ENST00000368436 CXCL11O14625 94 aa19.81■□□□□ 0.76
CKS1B-202ENST00000368436 EN2P19622 333 aaPredicted RBP19.81■□□□□ 0.76
CKS1B-202ENST00000368436 SLC9C1Q4G0N8 1177 aa19.81■□□□□ 0.76
CKS1B-202ENST00000368436 HMG20BQ9P0W2 317 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms