RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 GPR108Q9NPR9 543 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 V9GY48 417 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-206ENST00000368215 UBAP1LF5GYI3 381 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 KIF2AO00139 706 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-206ENST00000368215 ZNF174Q15697 407 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 TEX35Q5T0J7 233 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 NLRP10Q86W26 655 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 GJB4Q9NTQ9 266 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 WWC3Q9ULE0 1092 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 PCDHA7Q9UN72 937 aa9.7□□□□□ -0.86
PTPRK-206ENST00000368215 CTDP1Q9Y5B0 961 aaPredicted RBP9.7□□□□□ -0.86
PTPRK-206ENST00000368215 RICTORQ6R327 1708 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 CIAO1O76071 339 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 CCDC96Q2M329 555 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 SPTY2D1Q68D10 685 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-206ENST00000368215 HEATR3Q7Z4Q2 680 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 IFNL3Q8IZI9 196 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 CCDC150Q8NCX0 1101 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 ZSWIM4Q9H7M6 989 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 AATFQ9NY61 560 aaKnown RBP eCLIP9.69□□□□□ -0.86
PTPRK-206ENST00000368215 CLIC4Q9Y696 253 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 MROH5Q6ZUA9 1318 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 LMTK3Q96Q04 1460 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 LDHCP07864 332 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 MCM7P33993 719 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 PDIA6Q15084 440 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 NUP88Q99567 741 aaPredicted RBP9.69□□□□□ -0.86
PTPRK-206ENST00000368215 DEF6Q9H4E7 631 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 KCNH3Q9ULD8 1083 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 RTCBQ9Y3I0 505 aaKnown RBP9.69□□□□□ -0.86
PTPRK-206ENST00000368215 MRVI1Q9Y6F6 885 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 ELP1O95163 1332 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 ITSN1Q15811 1721 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 AKNAD1Q5T1N1 836 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 PLIN2Q99541 437 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 DNAI1Q9UI46 699 aa9.69□□□□□ -0.86
PTPRK-206ENST00000368215 GNG11P61952 73 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 KANK3Q6NY19 840 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 CRACR2BQ8N4Y2 399 aaPredicted RBP9.68□□□□□ -0.86
PTPRK-206ENST00000368215 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
PTPRK-206ENST00000368215 PATL2C9JE40 543 aaKnown RBP9.68□□□□□ -0.86
PTPRK-206ENST00000368215 POLR2DO15514 142 aaKnown RBP9.68□□□□□ -0.86
PTPRK-206ENST00000368215 VWA3AA6NCI4 1184 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 N4BP3O15049 544 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 IDEP14735 1019 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 KRT2P35908 639 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 PICALMQ13492 652 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 AIFM3Q96NN9 605 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 C1orf167Q5SNV9 1468 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 NDUFA8P51970 172 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 KIF4BQ2VIQ3 1234 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 TTLL11Q8NHH1 800 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 KAZALD1Q96I82 304 aa9.68□□□□□ -0.86
PTPRK-206ENST00000368215 LOC102724428A0A0B4J2F2 783 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PRKAB2O43741 272 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 ZNF500O60304 480 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 DEXIO95424 95 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 CASQ1P31415 396 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 HIBADHP31937 336 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 CRKLP46109 303 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 SIK1P57059 783 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 HSP90B2PQ58FF3 399 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 ADALQ6DHV7 355 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 CLIC6Q96NY7 704 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 VPS54Q9P1Q0 977 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 SAP30BPQ9UHR5 308 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 DENND2AQ9ULE3 1009 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PFKFB1P16118 471 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 FOXO4P98177 505 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 MYL5Q02045 173 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 STAMQ92783 540 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PYCARDQ9ULZ3 195 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PAXBP1Q9Y5B6 917 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 RTL9Q8NET4 1388 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 RIOK3O14730 519 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 TOM1O60784 492 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 MCAMP43121 646 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 CHRNDQ07001 517 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 RESTQ13127 1097 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PNOCQ13519 176 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 NOM1Q5C9Z4 860 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 FAM47AQ5JRC9 791 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 KIAA1328Q86T90 577 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 NYXQ9GZU5 481 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 CARMIL3Q8ND23 1372 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 SALL3Q9BXA9 1300 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 BTBD18B2RXH4 712 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 YEATS4O95619 227 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 LDHBP07195 334 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 PIH1D3Q9NQM4 214 aaKnown RBP9.67□□□□□ -0.86
PTPRK-206ENST00000368215 TCP11L1Q9NUJ3 509 aa9.67□□□□□ -0.86
PTPRK-206ENST00000368215 IFT172Q9UG01 1749 aa9.66□□□□□ -0.86
PTPRK-206ENST00000368215 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
PTPRK-206ENST00000368215 STAT6P42226 847 aa9.66□□□□□ -0.86
PTPRK-206ENST00000368215 SCARF1Q14162 830 aa9.66□□□□□ -0.86
PTPRK-206ENST00000368215 RILPL1Q5EBL4 403 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms