RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 ZNRF3Q9ULT6 936 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 TIAM2Q8IVF5 1701 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 MBD4O95243 580 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 VPS33BQ9H267 617 aa14.34□□□□□ -0.11
USF1-203ENST00000368021 DICER1Q9UPY3 1922 aaKnown RBP14.34□□□□□ -0.11
USF1-203ENST00000368021 CEP350Q5VT06 3117 aa14.33□□□□□ -0.11
USF1-203ENST00000368021 YDJCA8MPS7 323 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 PATL2C9JE40 543 aaKnown RBP14.33□□□□□ -0.12
USF1-203ENST00000368021 ECE2O60344 883 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.12
USF1-203ENST00000368021 PRDX5P30044 214 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 MECOMQ03112 1051 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 CXCL9Q07325 125 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 IMMTQ16891 758 aaKnown RBP14.33□□□□□ -0.12
USF1-203ENST00000368021 BLOC1S2Q6QNY1 142 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 ZNF384Q8TF68 577 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 TBC1D22AQ8WUA7 517 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 ALDH8A1Q9H2A2 487 aaPredicted RBP14.33□□□□□ -0.12
USF1-203ENST00000368021 FAM205AQ6ZU69 1335 aa14.33□□□□□ -0.12
USF1-203ENST00000368021 LDHBP07195 334 aaKnown RBP14.32□□□□□ -0.12
USF1-203ENST00000368021 ADGRA1Q86SQ6 560 aa14.32□□□□□ -0.12
USF1-203ENST00000368021 RIOK1Q9BRS2 568 aaKnown RBP14.32□□□□□ -0.12
USF1-203ENST00000368021 TAF6LQ9Y6J9 622 aa14.32□□□□□ -0.12
USF1-203ENST00000368021 MAGEB6P1A0A0J9YX57 407 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 HSP90AA2PQ14568 343 aaPredicted RBP14.31□□□□□ -0.12
USF1-203ENST00000368021 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 ARMT1Q9H993 441 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
USF1-203ENST00000368021 RPS6KB1P23443 525 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 DZIP1Q86YF9 867 aaKnown RBP14.31□□□□□ -0.12
USF1-203ENST00000368021 GPC2Q8N158 579 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 MIGA1Q8NAN2 632 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 TMX3Q96JJ7 454 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 SUGT1Q9Y2Z0 365 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 LAMA4Q16363 1823 aa14.31□□□□□ -0.12
USF1-203ENST00000368021 GSG1L2A8MUP6 293 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 POTECB2RU33 542 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 E7EWF7 191 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 ZNF213O14771 459 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 KIF3CO14782 793 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 APPP05067 770 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 AK2P54819 239 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 GSTO1P78417 241 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 ANKRD1Q15327 319 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 TTLL5Q6EMB2 1281 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 CIAPIN1Q6FI81 312 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 PODNQ7Z5L7 613 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 IFNL3Q8IZI9 196 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 JAG2Q9Y219 1238 aa14.3□□□□□ -0.12
USF1-203ENST00000368021 ZBTB12Q9Y330 459 aaPredicted RBP14.3□□□□□ -0.12
USF1-203ENST00000368021 VEGFAP15692 232 aaPredicted RBP14.29□□□□□ -0.12
USF1-203ENST00000368021 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 STOX1Q6ZVD7 989 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 NAPBQ9H115 298 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 SLKQ9H2G2 1235 aaPredicted RBP14.29□□□□□ -0.12
USF1-203ENST00000368021 EPB41L4AQ9HCS5 686 aaPredicted RBP14.29□□□□□ -0.12
USF1-203ENST00000368021 LIMCH1Q9UPQ0 1083 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 SLC4A4Q9Y6R1 1079 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 PSMD14O00487 310 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 CPA1P15085 419 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 DDIT3P35638 169 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 CUL4AQ13619 759 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 GIMAP6Q6P9H5 292 aa14.29□□□□□ -0.12
USF1-203ENST00000368021 LDHCP07864 332 aa14.28□□□□□ -0.12
USF1-203ENST00000368021 DHX32Q7L7V1 743 aaKnown RBP14.28□□□□□ -0.12
USF1-203ENST00000368021 INTS4Q96HW7 963 aaKnown RBP14.28□□□□□ -0.12
USF1-203ENST00000368021 CIZ1Q9ULV3 898 aaPredicted RBP14.28□□□□□ -0.12
USF1-203ENST00000368021 PCNTO95613 3336 aa14.28□□□□□ -0.12
USF1-203ENST00000368021 SCNN1DP51172 638 aa14.27□□□□□ -0.12
USF1-203ENST00000368021 GTF2IP78347 998 aa14.27□□□□□ -0.12
USF1-203ENST00000368021 TNIP1Q15025 636 aa14.27□□□□□ -0.12
USF1-203ENST00000368021 L1TD1Q5T7N2 865 aaKnown RBP14.27□□□□□ -0.12
USF1-203ENST00000368021 SLF2Q8IX21 1173 aa14.27□□□□□ -0.12
USF1-203ENST00000368021 FBXL16Q8N461 479 aa14.27□□□□□ -0.12
USF1-203ENST00000368021 SPRYD3Q8NCJ5 442 aa14.27□□□□□ -0.12
USF1-203ENST00000368021 FAM163AQ96GL9 167 aaPredicted RBP14.27□□□□□ -0.12
USF1-203ENST00000368021 ZSCAN31Q96LW9 406 aaPredicted RBP14.27□□□□□ -0.12
USF1-203ENST00000368021 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.12
USF1-203ENST00000368021 SH2B1Q9NRF2 756 aaPredicted RBP14.27□□□□□ -0.12
USF1-203ENST00000368021 PRKAB2O43741 272 aa14.27□□□□□ -0.13
USF1-203ENST00000368021 EPS15P42566 896 aa14.27□□□□□ -0.13
USF1-203ENST00000368021 GMPSP49915 693 aaPredicted RBP14.27□□□□□ -0.13
USF1-203ENST00000368021 PPP4CP60510 307 aa14.27□□□□□ -0.13
USF1-203ENST00000368021 HAND2P61296 217 aa14.27□□□□□ -0.13
USF1-203ENST00000368021 EXOSC10Q01780 885 aaKnown RBP14.27□□□□□ -0.13
USF1-203ENST00000368021 COL9A3Q14050 684 aaPredicted RBP14.27□□□□□ -0.13
USF1-203ENST00000368021 MXD3Q9BW11 206 aa14.27□□□□□ -0.13
USF1-203ENST00000368021 CRNKL1Q9BZJ0 848 aaKnown RBP14.27□□□□□ -0.13
USF1-203ENST00000368021 AATFQ9NY61 560 aaKnown RBP eCLIP14.27□□□□□ -0.13
USF1-203ENST00000368021 MYH2Q9UKX2 1941 aa14.27□□□□□ -0.13
USF1-203ENST00000368021 SHTN1A0MZ66 631 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 BAG3O95817 575 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 POTEIP0CG38 1075 aa14.26□□□□□ -0.13
USF1-203ENST00000368021 POTEJP0CG39 1038 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms