RNA–Protein interactions for RNA: ENST00000364266.1

RNU6-353P-201, Transcript of RNA, U6 small nuclear 353, pseudogene, humanhuman

BASIC

Gene RNU6-353P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-353P-201ENST00000364266 GTF2F1P35269 517 aaKnown RBP eCLIP7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 NLRP12P59046 1061 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 PDE3AQ14432 1141 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 SETDB1Q15047 1291 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 FAM196AQ6ZSG2 479 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 DTWD1Q8N5C7 304 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 GATAD2BQ8WXI9 593 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 SEC16BQ96JE7 1060 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 GMLQ99445 158 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 UBP1Q9NZI7 540 aa7.09□□□□□ -1.27
RNU6-353P-201ENST00000364266 TLR3O15455 904 aaKnown RBP7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 SSBP05455 408 aaKnown RBP eCLIP7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 CD68P34810 354 aaPredicted RBP7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 ZNF252P-AS1Q0IIN9 211 aa7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 COL9A2Q14055 689 aaPredicted RBP7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 CWF19L2Q2TBE0 894 aaKnown RBP7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 PDZD3Q86UT5 571 aa7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 EFR3BQ9Y2G0 817 aa7.08□□□□□ -1.28
RNU6-353P-201ENST00000364266 MCM4P33991 863 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 NASPP49321 788 aaPredicted RBP7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 COL9A3Q14050 684 aaPredicted RBP7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 MPP2Q14168 576 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 SEZ6Q53EL9 994 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 GALNT11Q8NCW6 608 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 CPLX3Q8WVH0 158 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 KRT82Q9NSB4 513 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 GINM1Q9NU53 330 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 PCDHA4Q9UN74 947 aa7.07□□□□□ -1.28
RNU6-353P-201ENST00000364266 DDX3YO15523 660 aaKnown RBP7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 CILPO75339 1184 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 TRIM28Q13263 835 aaKnown RBP7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 FBXO11Q86XK2 927 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 GPBAR1Q8TDU6 330 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 DHX38Q92620 1227 aaKnown RBP7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 GAL3ST3Q96A11 431 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 PLVAPQ9BX97 442 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 CCDC86Q9H6F5 360 aaKnown RBP7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 RAD18Q9NS91 495 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 MKL2Q9ULH7 1088 aa7.06□□□□□ -1.28
RNU6-353P-201ENST00000364266 A0A0A0MRY4 1105 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 FAM221AA4D161 298 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 GNB5O14775 395 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 DEAF1O75398 565 aaPredicted RBP7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 STK10O94804 968 aaKnown RBP7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 ECEL1O95672 775 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 ZNF165P49910 485 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 RPL6Q02878 288 aaKnown RBP7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 DUOXA2Q1HG44 320 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 MPRIPQ6WCQ1 1025 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 PODNQ7Z5L7 613 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 MCF2L2Q86YR7 1114 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 FMR1NBQ8N0W7 255 aaPredicted RBP7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 FBXO27Q8NI29 283 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 LRRC3Q9BY71 257 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 NRSN2Q9GZP1 204 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 STRIP2Q9ULQ0 834 aa7.05□□□□□ -1.28
RNU6-353P-201ENST00000364266 FGRP09769 529 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 SLFN14P0C7P3 912 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 HOXB4P17483 251 aaPredicted RBP7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 LIG1P18858 919 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 CRKP46108 304 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 SOX9P48436 509 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 SNRPNP63162 240 aaKnown RBP7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 PTPN11Q06124 597 aaPredicted RBP7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 FOXD4L6Q3SYB3 417 aaPredicted RBP7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 PRRT3Q5FWE3 981 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 FOXD4L3Q6VB84 417 aaPredicted RBP7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 HDXQ7Z353 690 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 REC114Q7Z4M0 266 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 SLITRK4Q8IW52 837 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 ELMO3Q96BJ8 720 aa7.04□□□□□ -1.28
RNU6-353P-201ENST00000364266 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 ADAM11O75078 769 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 ARHGEF15O94989 841 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 FBXW10Q5XX13 1052 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 LINC00114Q6XXX2 140 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 ILDR2Q71H61 639 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 UBASH3BQ8TF42 649 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 TRIM11Q96F44 468 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 FERD3LQ96RJ6 166 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 DNAJC2Q99543 621 aaKnown RBP7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 RUSC1Q9BVN2 902 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 HIRIP3Q9BW71 556 aaPredicted RBP7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 BRMS1Q9HCU9 246 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 KCNK4Q9NYG8 393 aa7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 NOP53Q9NZM5 478 aaKnown RBP7.03□□□□□ -1.28
RNU6-353P-201ENST00000364266 DLL1O00548 723 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 ZNF862O60290 1169 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 CTSBP07858 339 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 WIPI1Q5MNZ9 446 aaPredicted RBP7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 EXOSC6Q5RKV6 272 aaKnown RBP7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 GK5Q6ZS86 529 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 CRBNQ96SW2 442 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 SRRTQ9BXP5 876 aaKnown RBP7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 PICK1Q9NRD5 415 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 CACNA2D2Q9NY47 1150 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 SNCAIPQ9Y6H5 919 aa7.02□□□□□ -1.29
RNU6-353P-201ENST00000364266 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms