RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 LMBR1LQ6UX01 489 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 KLRG1Q96E93 195 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 EFCC1Q9HA90 598 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 CABP5Q9NP86 173 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 PRDM5Q9NQX1 630 aaPredicted RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 ADARB2Q9NS39 739 aaKnown RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 PODXL2Q9NZ53 605 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 COL5A2P05997 1499 aaPredicted RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 MGAMO43451 1857 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 CEMIPQ8WUJ3 1361 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 ECE2O60344 883 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 AOC2O75106 756 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 IFIT2P09913 472 aaKnown RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 RARSP54136 660 aaKnown RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 CWF19L2Q2TBE0 894 aaKnown RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 SLC9C1Q4G0N8 1177 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 LAPTM4BQ86VI4 370 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 CCDC102AQ96A19 550 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 LBHD1Q9BQE6 289 aaPredicted RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 ANKRD2Q9GZV1 360 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 EXOSC9Q06265 439 aaKnown RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 CCDC158Q5M9N0 1113 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 COL13A1Q5TAT6 717 aaPredicted RBP4.61□□□□□ -1.67
SMC1B-201ENST00000357450 SUSD4Q5VX71 490 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 ATF7IPQ6VMQ6 1270 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 SLF2Q8IX21 1173 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 MICALL1Q8N3F8 863 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 RSPH6AQ9H0K4 717 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 SNRKQ9NRH2 765 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 NR2E3Q9Y5X4 410 aa4.61□□□□□ -1.67
SMC1B-201ENST00000357450 TFRCP02786 760 aaKnown RBP4.6□□□□□ -1.67
SMC1B-201ENST00000357450 HOXD10P28358 340 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 PDE3AQ14432 1141 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 MIGA2Q7L4E1 593 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 GAS2L3Q86XJ1 694 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 DNAAF4Q8WXU2 420 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 TAF1DQ9H5J8 278 aaPredicted RBP4.6□□□□□ -1.67
SMC1B-201ENST00000357450 A0A0G2JMZ2 1700 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 TNRC6CQ9HCJ0 1690 aaKnown RBP4.6□□□□□ -1.67
SMC1B-201ENST00000357450 ARID2Q68CP9 1835 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 MAP3K15Q6ZN16 1313 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 USP17L3A6NCW0 530 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 USP17L4A6NCW7 530 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 EVI5O60447 810 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 SURF6O75683 361 aaKnown RBP4.6□□□□□ -1.67
SMC1B-201ENST00000357450 RFX1P22670 979 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 USP17L1Q7RTZ2 530 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 SEC31BQ9NQW1 1179 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 TMOD4Q9NZQ9 345 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 NOD1Q9Y239 953 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 TBC1D8O95759 1140 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 IL13P35225 146 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 SREBF2Q12772 1141 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 RRP12Q5JTH9 1297 aaKnown RBP4.6□□□□□ -1.67
SMC1B-201ENST00000357450 DCAF15Q66K64 600 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 HOOK2Q96ED9 719 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 ELP3Q9H9T3 547 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 MYH6P13533 1939 aa4.6□□□□□ -1.67
SMC1B-201ENST00000357450 TRIM6-TRIM34B2RNG4 842 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 ADM5C9JUS6 153 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 PDE8AO60658 829 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 HLA-DOAP06340 250 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 ITGA6P23229 1130 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 HIBADHP31937 336 aaKnown RBP4.59□□□□□ -1.67
SMC1B-201ENST00000357450 VEGFBP49765 207 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 CXCL9Q07325 125 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 CLEC4GQ6UXB4 293 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 GIGYF2Q6Y7W6 1299 aaKnown RBP4.59□□□□□ -1.67
SMC1B-201ENST00000357450 GPATCH3Q96I76 525 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 IPO9Q96P70 1041 aaKnown RBP4.59□□□□□ -1.67
SMC1B-201ENST00000357450 POLRMTO00411 1230 aaKnown RBP4.59□□□□□ -1.67
SMC1B-201ENST00000357450 PSMD14O00487 310 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 HMMRO75330 724 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 LDHCP07864 332 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 ATP2B4P23634 1241 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 DDX21Q9NR30 783 aaKnown RBP eCLIP4.59□□□□□ -1.67
SMC1B-201ENST00000357450 ZBTB40Q9NUA8 1239 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 STK24Q9Y6E0 443 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 NSD2O96028 1365 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 LCTP09848 1927 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 ANKRD31Q8N7Z5 1873 aa4.59□□□□□ -1.67
SMC1B-201ENST00000357450 WDR33Q9C0J8 1336 aaKnown RBP4.59□□□□□ -1.67
SMC1B-201ENST00000357450 TNS2Q63HR2 1409 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 GSPT1P15170 499 aaKnown RBP4.59□□□□□ -1.68
SMC1B-201ENST00000357450 CACNB3P54284 484 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 KIF23Q02241 960 aaPredicted RBP4.59□□□□□ -1.68
SMC1B-201ENST00000357450 GRAPQ13588 217 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 SCARF1Q14162 830 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 RAB3GAP1Q15042 981 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 STYK1Q6J9G0 422 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 GPC2Q8N158 579 aa4.59□□□□□ -1.68
SMC1B-201ENST00000357450 GRAPLQ8TC17 118 aaPredicted RBP4.59□□□□□ -1.68
SMC1B-201ENST00000357450 PHAXQ9H814 394 aaKnown RBP4.59□□□□□ -1.68
SMC1B-201ENST00000357450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.59□□□□□ -1.68
SMC1B-201ENST00000357450 BRCA1P38398 1863 aaKnown RBP4.58□□□□□ -1.68
SMC1B-201ENST00000357450 AHDC1Q5TGY3 1603 aaPredicted RBP4.58□□□□□ -1.68
SMC1B-201ENST00000357450 TRIM75PA6NK02 468 aa4.58□□□□□ -1.68
SMC1B-201ENST00000357450 PPP1R3GB7ZBB8 358 aa4.58□□□□□ -1.68
SMC1B-201ENST00000357450 TNPO2O14787 897 aaKnown RBP4.58□□□□□ -1.68
SMC1B-201ENST00000357450 LDHBP07195 334 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms