RNA–Protein interactions for RNA: ENST00000356906.7

NBR2-201, neighbor of BRCA1 lncRNA 2, humanhuman

TSL 1 (best)

Gene NBR2, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR2-201ENST00000356906 A0A087WZG4 1122 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 H7C1W4 665 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 MBD3O95983 291 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 ADH1CP00326 375 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 A1BGP04217 495 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 TIMP2P16035 220 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 ATP5JP18859 108 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 CRKLP46109 303 aaKnown RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 KCNJ4P48050 445 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 PIP4K2AP48426 406 aaPredicted RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 SCARF1Q14162 830 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 R3HDM1Q15032 1099 aaKnown RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 ANKRD1Q15327 319 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 SLC15A2Q16348 729 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 CSPP1Q1MSJ5 1256 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 LINC01559Q495D7 138 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 NBPF14Q5TI25 921 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 TSHZ3Q63HK5 1081 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 CWC27Q6UX04 472 aaKnown RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 AMIGO3Q86WK7 504 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 ZNF511Q8NB15 262 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 KCNB2Q92953 911 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 LSG1Q9H089 658 aaKnown RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 SH2B1Q9NRF2 756 aaPredicted RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 CWC25Q9NXE8 425 aaPredicted RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 STK32BQ9NY57 414 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 HMG20BQ9P0W2 317 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 CYP46A1Q9Y6A2 500 aa9.3□□□□□ -0.92
NBR2-201ENST00000356906 DDX49Q9Y6V7 483 aaKnown RBP9.3□□□□□ -0.92
NBR2-201ENST00000356906 SASH1O94885 1247 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 KRT32Q14532 448 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 VPS53Q5VIR6 699 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 INTS5Q6P9B9 1019 aaKnown RBP9.29□□□□□ -0.92
NBR2-201ENST00000356906 LRP10Q7Z4F1 713 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 BAP1Q92560 729 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 SYAP1Q96A49 352 aaPredicted RBP9.29□□□□□ -0.92
NBR2-201ENST00000356906 KAZALD1Q96I82 304 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 AK7Q96M32 723 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 ALDH8A1Q9H2A2 487 aaPredicted RBP9.29□□□□□ -0.92
NBR2-201ENST00000356906 CCDC87Q9NVE4 849 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 TFCP2L1Q9NZI6 479 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 SNX14Q9Y5W7 946 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 CASZ1Q86V15 1759 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 CNTNAP4Q9C0A0 1308 aa9.29□□□□□ -0.92
NBR2-201ENST00000356906 STARD3NLO95772 234 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
NBR2-201ENST00000356906 IL15P40933 162 aaPredicted RBP9.28□□□□□ -0.92
NBR2-201ENST00000356906 HSP90AB3PQ58FF7 597 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 MCTP1Q6DN14 999 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 DESI1Q6ICB0 168 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 UBE3BQ7Z3V4 1068 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 EAF2Q96CJ1 260 aaPredicted RBP9.28□□□□□ -0.92
NBR2-201ENST00000356906 FSD1Q9BTV5 496 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 PDGFDQ9GZP0 370 aaPredicted RBP9.28□□□□□ -0.92
NBR2-201ENST00000356906 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
NBR2-201ENST00000356906 PA2G4Q9UQ80 394 aaKnown RBP9.28□□□□□ -0.92
NBR2-201ENST00000356906 ZBTB1Q9Y2K1 713 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 CCDC171Q6TFL3 1326 aa9.28□□□□□ -0.92
NBR2-201ENST00000356906 TULP1O00294 542 aaPredicted RBP9.27□□□□□ -0.93
NBR2-201ENST00000356906 RPS6KA4O75676 772 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 CIAO1O76071 339 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 BRD1O95696 1058 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 WDR4P57081 412 aaKnown RBP9.27□□□□□ -0.93
NBR2-201ENST00000356906 TRIM28Q13263 835 aaKnown RBP9.27□□□□□ -0.93
NBR2-201ENST00000356906 TNNI3KQ59H18 835 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 KIF6Q6ZMV9 814 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 FAM43AQ8N2R8 423 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 MAP4K1Q92918 833 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
NBR2-201ENST00000356906 KLF16Q9BXK1 252 aaPredicted RBP9.27□□□□□ -0.93
NBR2-201ENST00000356906 GRPEL1Q9HAV7 217 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 PDRG1Q9NUG6 133 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 PALD1Q9ULE6 856 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 AKAP2Q9Y2D5 859 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 ZNF330Q9Y3S2 320 aaPredicted RBP9.27□□□□□ -0.93
NBR2-201ENST00000356906 FPGT-TNNI3KV9GXZ4 949 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 PNPLA7Q6ZV29 1317 aa9.27□□□□□ -0.93
NBR2-201ENST00000356906 LETM1O95202 739 aaPredicted RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 PDCP20941 246 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 RFX5P48382 616 aaPredicted RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 ZNF445P59923 1031 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 NECTIN1Q15223 517 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 TSGA10IPQ3SY00 556 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 NBPF10Q6P3W6 841 aaKnown RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 RUFY3Q7L099 469 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 COL23A1Q86Y22 540 aaPredicted RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 ZGPATQ8N5A5 531 aaKnown RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 NBPF15Q8N660 670 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.26□□□□□ -0.93
NBR2-201ENST00000356906 CCDC8Q9H0W5 538 aaPredicted RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 SIL1Q9H173 461 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 LMBRD1Q9NUN5 540 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 SMC3Q9UQE7 1217 aa9.26□□□□□ -0.93
NBR2-201ENST00000356906 RTCBQ9Y3I0 505 aaKnown RBP9.26□□□□□ -0.93
NBR2-201ENST00000356906 BCORQ6W2J9 1755 aa9.25□□□□□ -0.93
NBR2-201ENST00000356906 SPDYE5A6NIY4 337 aa9.25□□□□□ -0.93
NBR2-201ENST00000356906 HMGB1P09429 215 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms