RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DNAJB2P25686 324 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 LMOD1P29536 600 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-202ENST00000356162 KCNC4Q03721 635 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 G3BP1Q13283 466 aaKnown RBP eCLIP4.91□□□□□ -1.62
CNOT4-202ENST00000356162 ATP2B3Q16720 1220 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 HSP90AB4PQ58FF6 505 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 ERC1Q8IUD2 1116 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 SLF2Q8IX21 1173 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 ZNF526Q8TF50 670 aaPredicted RBP4.91□□□□□ -1.62
CNOT4-202ENST00000356162 LPIN2Q92539 896 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 NMRK2Q9NPI5 230 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 HACL1Q9UJ83 578 aa4.91□□□□□ -1.62
CNOT4-202ENST00000356162 USP17L3A6NCW0 530 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 USP17L4A6NCW7 530 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 PSMD14O00487 310 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 RAD17O75943 681 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 VIL1P09327 827 aaKnown RBP4.9□□□□□ -1.62
CNOT4-202ENST00000356162 IL1R1P14778 569 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 VEGFAP15692 232 aaPredicted RBP4.9□□□□□ -1.62
CNOT4-202ENST00000356162 FKBP1AP62942 108 aaKnown RBP4.9□□□□□ -1.62
CNOT4-202ENST00000356162 RSBN1LQ6PCB5 846 aaPredicted RBP4.9□□□□□ -1.62
CNOT4-202ENST00000356162 USP17L1Q7RTZ2 530 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 AGBL3Q8NEM8 1001 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 CRBNQ96SW2 442 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 TMEM134Q9H6X4 195 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 CD209Q9NNX6 404 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 GPR108Q9NPR9 543 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 AKAP2Q9Y2D5 859 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 GJA3Q9Y6H8 435 aa4.9□□□□□ -1.62
CNOT4-202ENST00000356162 PDS5AQ29RF7 1337 aaKnown RBP4.9□□□□□ -1.63
CNOT4-202ENST00000356162 FAM205AQ6ZU69 1335 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 SNAP23O00161 211 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 HIBADHP31937 336 aaKnown RBP4.9□□□□□ -1.63
CNOT4-202ENST00000356162 GMPSP49915 693 aaPredicted RBP4.9□□□□□ -1.63
CNOT4-202ENST00000356162 MMP14P50281 582 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 SCNN1DP51172 638 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 APLP1P51693 650 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 OS9Q13438 667 aaPredicted RBP4.9□□□□□ -1.63
CNOT4-202ENST00000356162 CAVIN4Q5BKX8 364 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 STRIP1Q5VSL9 837 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 FBXO33Q7Z6M2 555 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 TXNRD3Q86VQ6 643 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 DPF2Q92785 391 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 GPRC5DQ9NZD1 345 aa4.9□□□□□ -1.63
CNOT4-202ENST00000356162 COL1A1P02452 1464 aaPredicted RBP4.9□□□□□ -1.63
CNOT4-202ENST00000356162 RCCD1A6NED2 376 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 WTIPA6NIX2 430 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 POTECB2RU33 542 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 SURF6O75683 361 aaKnown RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 RGS20O76081 388 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 TFCP2Q12800 502 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 TJAP1Q5JTD0 557 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 DACT2Q5SW24 774 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 C16orf71Q8IYS4 520 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 TDRD7Q8NHU6 1098 aaKnown RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 FAM84BQ96KN1 310 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 TAF1DQ9H5J8 278 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 RRAGCQ9HB90 399 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 SRCAPQ6ZRS2 3230 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 DOCK2Q92608 1830 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 RAB11FIP3O75154 756 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 SASH1O94885 1247 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 OATP04181 439 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 FECHP22830 423 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 EPHX2P34913 555 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 GYG1P46976 350 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 ZNF280AP59817 542 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 USP50Q70EL3 339 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 PNMA8AQ86V59 439 aaPredicted RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 LDHDQ86WU2 507 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 VPS37DQ86XT2 251 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 SIRT2Q8IXJ6 389 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 GMLQ99445 158 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 ADARB2Q9NS39 739 aaKnown RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 GNL3LQ9NVN8 582 aaKnown RBP4.89□□□□□ -1.63
CNOT4-202ENST00000356162 TRPM7Q96QT4 1865 aa4.89□□□□□ -1.63
CNOT4-202ENST00000356162 A0A1B0GUL7 405 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 H7C1D1 291 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 ADORA1P30542 326 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 SLC4A3P48751 1232 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 FSTL1Q12841 308 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 TNNI3KQ59H18 835 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 SMC1BQ8NDV3 1235 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 PXYLP1Q8TE99 480 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 TBC1D22AQ8WUA7 517 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 KIF1BPQ96EK5 621 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 MTRQ99707 1265 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 FPGT-TNNI3KV9GXZ4 949 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 AKAP11Q9UKA4 1901 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 MAST3O60307 1309 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 SALL1Q9NSC2 1324 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 TOMM70O94826 608 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 ARID4AP29374 1257 aaPredicted RBP4.88□□□□□ -1.63
CNOT4-202ENST00000356162 GTF2IP78347 998 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 KIF4BQ2VIQ3 1234 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 TTLL5Q6EMB2 1281 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 METTL3Q86U44 580 aaKnown RBP4.88□□□□□ -1.63
CNOT4-202ENST00000356162 XAGE2Q96GT9 111 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 KCNQ5Q9NR82 932 aa4.88□□□□□ -1.63
CNOT4-202ENST00000356162 CNOT7Q9UIV1 285 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms