RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 SLIT1O75093 1534 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 CASP7P55210 303 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 PPP2R3AQ06190 1150 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 SMC1AQ14683 1233 aaKnown RBP11.67□□□□□ -0.54
PTPRA-203ENST00000356147 KRT40Q6A162 431 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 WWC2Q6AWC2 1192 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 VSTM4Q8IW00 320 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 BPIFA3Q9BQP9 254 aa11.67□□□□□ -0.54
PTPRA-203ENST00000356147 A1BGP04217 495 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 SNRPA1P09661 255 aaKnown RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 PRR29P0C7W0 189 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 RAD51AP2Q09MP3 1159 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 SLC39A14Q15043 492 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 CHRNA2Q15822 529 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 LRRFIP1Q32MZ4 808 aaKnown RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 TTC39AQ5SRH9 613 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 CC2D1AQ6P1N0 951 aaPredicted RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 OLFM4Q6UX06 510 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 BAG1Q99933 345 aaPredicted RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 PARD6BQ9BYG5 372 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 SUGCTQ9HAC7 445 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 PHLPP2Q6ZVD8 1323 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 MCM6Q14566 821 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 TMEM139Q8IV31 216 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 SAMSN1Q9NSI8 373 aaKnown RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 B4E1Z4 1266 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 ZNF213O14771 459 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 CASP1P29466 404 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 KLHL10Q6JEL2 608 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 MB21D2Q8IYB1 491 aaPredicted RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 CCDC12Q8WUD4 166 aaPredicted RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 MRPL44Q9H9J2 332 aaKnown RBP11.66□□□□□ -0.54
PTPRA-203ENST00000356147 NFAT5O94916 1531 aa11.66□□□□□ -0.54
PTPRA-203ENST00000356147 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 TRIM66O15016 1216 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 PHKG2P15735 406 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 LMAN1P49257 510 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 STX17P56962 302 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 CYB5R4Q7L1T6 521 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 LCMT1Q9UIC8 334 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 ABCC6O95255 1503 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 KDM6AO15550 1401 aaPredicted RBP11.65□□□□□ -0.54
PTPRA-203ENST00000356147 SOWAHDA6NJG2 315 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 EYA2O00167 538 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 IKBKBO14920 756 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 GPAA1O43292 621 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 DHX16O60231 1041 aaKnown RBP11.65□□□□□ -0.54
PTPRA-203ENST00000356147 BRAPQ7Z569 592 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 NCOA7Q8NI08 942 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 KCNJ14Q9UNX9 436 aa11.65□□□□□ -0.54
PTPRA-203ENST00000356147 MYH15Q9Y2K3 1946 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 H3BQF6 201 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 METAP2P50579 478 aaKnown RBP eCLIP11.64□□□□□ -0.55
PTPRA-203ENST00000356147 SKIDA1Q1XH10 827 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 NFXL1Q6ZNB6 911 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 CREBRFQ8IUR6 639 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 SYNE4Q8N205 404 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 XAGE2Q96GT9 111 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 TUBE1Q9UJT0 475 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 KCNH3Q9ULD8 1083 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 ZSCAN12O43309 604 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 TC2NQ8N9U0 490 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 ARFGAP3Q9NP61 516 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 SEC31BQ9NQW1 1179 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 CEP126Q9P2H0 1117 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 MRC1P22897 1456 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 POLR2DO15514 142 aaKnown RBP11.64□□□□□ -0.55
PTPRA-203ENST00000356147 CYP27B1O15528 508 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 TEX33O43247 280 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 CBFA2T2O43439 604 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 PHACTR2O75167 634 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 IL15P40933 162 aaPredicted RBP11.64□□□□□ -0.55
PTPRA-203ENST00000356147 PTPAQ15257 358 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 CCDC158Q5M9N0 1113 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 CCDC102BQ68D86 513 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 C10orf67Q8IYJ2 551 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 ZKSCAN3Q9BRR0 538 aa11.64□□□□□ -0.55
PTPRA-203ENST00000356147 RNF216Q9NWF9 866 aaPredicted RBP11.64□□□□□ -0.55
PTPRA-203ENST00000356147 ARHGAP6O43182 974 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 ABL1P00519 1130 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 GUCY1A2P33402 732 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 CABP4P57796 275 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 SLC26A6Q9BXS9 759 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 NBPF3Q9H094 633 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
PTPRA-203ENST00000356147 SERTAD1Q9UHV2 236 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 LMO7Q8WWI1 1683 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 BTBD18B2RXH4 712 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
PTPRA-203ENST00000356147 N4BP1O75113 896 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms