RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 MXD3Q9BW11 206 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
SVIP-201ENST00000354193 CSPP1Q1MSJ5 1256 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 XDHP47989 1333 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 BAZ2BQ9UIF8 2168 aaKnown RBP12.98□□□□□ -0.33
SVIP-201ENST00000354193 CYP2D6P10635 497 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 DDR1Q08345 913 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 TEX11Q8IYF3 940 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 PANK2Q9BZ23 570 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 RNF41Q9H4P4 317 aaPredicted RBP12.98□□□□□ -0.33
SVIP-201ENST00000354193 NHSL1Q5SYE7 1610 aa12.98□□□□□ -0.33
SVIP-201ENST00000354193 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
SVIP-201ENST00000354193 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
SVIP-201ENST00000354193 RBM26Q5T8P6 1007 aaKnown RBP12.97□□□□□ -0.33
SVIP-201ENST00000354193 VGLL2Q8N8G2 317 aa12.97□□□□□ -0.33
SVIP-201ENST00000354193 ESR2Q92731 530 aa12.97□□□□□ -0.33
SVIP-201ENST00000354193 ZDHHC9Q9Y397 364 aa12.97□□□□□ -0.33
SVIP-201ENST00000354193 PPEF1O14829 653 aaPredicted RBP12.97□□□□□ -0.33
SVIP-201ENST00000354193 IKQ13123 557 aaPredicted RBP12.97□□□□□ -0.33
SVIP-201ENST00000354193 CKAP2LQ8IYA6 745 aa12.97□□□□□ -0.33
SVIP-201ENST00000354193 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
SVIP-201ENST00000354193 AIFM3Q96NN9 605 aa12.97□□□□□ -0.33
SVIP-201ENST00000354193 MED23Q9ULK4 1368 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 BRD1O95696 1058 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 USP17L8P0C7I0 530 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 AKNAD1Q5T1N1 836 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 LDHCP07864 332 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 PPARAQ07869 468 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 IFIT1BQ5T764 474 aaKnown RBP12.96□□□□□ -0.33
SVIP-201ENST00000354193 HOMER1Q86YM7 354 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 RASSF8Q8NHQ8 419 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 ZSWIM5Q9P217 1185 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
SVIP-201ENST00000354193 CACNB3P54284 484 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 CUL4AQ13619 759 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 PROM2Q8N271 834 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 GTF3C6Q969F1 213 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 ALG1Q9BT22 464 aa12.96□□□□□ -0.33
SVIP-201ENST00000354193 FGFR2P21802 821 aa12.96□□□□□ -0.34
SVIP-201ENST00000354193 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.34
SVIP-201ENST00000354193 CRACR2BQ8N4Y2 399 aaPredicted RBP12.96□□□□□ -0.34
SVIP-201ENST00000354193 WDR66Q8TBY9 1149 aa12.96□□□□□ -0.34
SVIP-201ENST00000354193 DYNLL2Q96FJ2 89 aa12.96□□□□□ -0.34
SVIP-201ENST00000354193 SDF4Q9BRK5 362 aa12.96□□□□□ -0.34
SVIP-201ENST00000354193 C21orf2O43822 256 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 ADRA2BP18089 450 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 PDIA3P30101 505 aaKnown RBP12.95□□□□□ -0.34
SVIP-201ENST00000354193 FTOQ9C0B1 505 aaKnown RBP eCLIP12.95□□□□□ -0.34
SVIP-201ENST00000354193 PDGFDQ9GZP0 370 aaPredicted RBP12.95□□□□□ -0.34
SVIP-201ENST00000354193 USP54Q70EL1 1684 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 ADGRA1Q86SQ6 560 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 KRT23Q9C075 422 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 SENP2Q9HC62 589 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 AFDNP55196 1824 aaKnown RBP12.95□□□□□ -0.34
SVIP-201ENST00000354193 MBD3O95983 291 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 HMGN5P82970 282 aaKnown RBP12.95□□□□□ -0.34
SVIP-201ENST00000354193 PDE4BQ07343 736 aa12.95□□□□□ -0.34
SVIP-201ENST00000354193 COL16A1Q07092 1604 aaPredicted RBP12.95□□□□□ -0.34
SVIP-201ENST00000354193 GNAT2P19087 354 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 MTMR6Q9Y217 621 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 ABCC6O95255 1503 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 GSG1L2A8MUP6 293 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 TSPY3P0CV98 308 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 TSPY8P0CW00 308 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 RTN1Q16799 776 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 GIMAP6Q6P9H5 292 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 CCDC73Q6ZRK6 1079 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 CYB5R4Q7L1T6 521 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 SLC44A5Q8NCS7 719 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 MARCKSP29966 332 aaPredicted RBP12.94□□□□□ -0.34
SVIP-201ENST00000354193 CATIPQ7Z7H3 387 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 CTCFLQ8NI51 663 aaPredicted RBP12.94□□□□□ -0.34
SVIP-201ENST00000354193 NEDD4P46934 1319 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 BBOX1O75936 387 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 PDE6BP35913 854 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 IL27Q8NEV9 243 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
SVIP-201ENST00000354193 PSDA5PKW4 1024 aaPredicted RBP12.93□□□□□ -0.34
SVIP-201ENST00000354193 NASPP49321 788 aaPredicted RBP12.93□□□□□ -0.34
SVIP-201ENST00000354193 LMBRD1Q9NUN5 540 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 NMT2O60551 498 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 BTDP43251 543 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 SSRP1Q08945 709 aaKnown RBP12.93□□□□□ -0.34
SVIP-201ENST00000354193 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.93□□□□□ -0.34
SVIP-201ENST00000354193 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
SVIP-201ENST00000354193 LEMD3Q9Y2U8 911 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 PPIP5K2O43314 1243 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 ATP2B4P23634 1241 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 DRC7Q8IY82 874 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 GRPEL1Q9HAV7 217 aa12.93□□□□□ -0.34
SVIP-201ENST00000354193 EPB41L2O43491 1005 aaKnown RBP12.92□□□□□ -0.34
SVIP-201ENST00000354193 ALDH1B1P30837 517 aa12.92□□□□□ -0.34
SVIP-201ENST00000354193 CNNM2Q9H8M5 875 aa12.92□□□□□ -0.34
SVIP-201ENST00000354193 KCNJ14Q9UNX9 436 aa12.92□□□□□ -0.34
SVIP-201ENST00000354193 CDKL5O76039 1030 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms