RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 PPATQ06203 517 aa11.86□□□□□ -0.51
UBE2D3-205ENST00000350435 KHSRPQ92945 711 aaKnown RBP eCLIP11.86□□□□□ -0.513e-7■■■□□ 18.3
UBE2D3-205ENST00000350435 ZKSCAN4Q969J2 545 aaPredicted RBP11.86□□□□□ -0.51
UBE2D3-205ENST00000350435 TIFAQ96CG3 184 aa11.86□□□□□ -0.51
UBE2D3-205ENST00000350435 PRDM12Q9H4Q4 367 aa11.86□□□□□ -0.51
UBE2D3-205ENST00000350435 MIS18AQ9NYP9 233 aa11.86□□□□□ -0.51
UBE2D3-205ENST00000350435 LRRC37A2A6NM11 1700 aa11.86□□□□□ -0.51
UBE2D3-205ENST00000350435 PLXNA1Q9UIW2 1896 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 TRIM32Q13049 653 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 CSPP1Q1MSJ5 1256 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 BADQ92934 168 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 TEPSINQ96N21 525 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 WRNIP1Q96S55 665 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 SENP6Q9GZR1 1112 aaPredicted RBP11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 FRMPD3Q5JV73 1810 aa11.85□□□□□ -0.51
UBE2D3-205ENST00000350435 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 TNNI2P48788 182 aa11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 RTL5Q5HYW3 569 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 CDAN1Q8IWY9 1227 aa11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 PRDM5Q9NQX1 630 aaPredicted RBP11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 CACNA1BQ00975 2339 aa11.84□□□□□ -0.51
UBE2D3-205ENST00000350435 IRS4O14654 1257 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 ATN1P54259 1190 aaPredicted RBP11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 DCTN1Q14203 1278 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 COPS6Q7L5N1 327 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 ANKRD18AQ8IVF6 992 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 PHACTR3Q96KR7 559 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 PANK3Q9H999 370 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 C5orf42Q9H799 3197 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 AOX1Q06278 1338 aa11.83□□□□□ -0.52
UBE2D3-205ENST00000350435 KRT37O76014 449 aa11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 RTP1P59025 263 aa11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 EIF4A1P60842 406 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 PNISRQ8TF01 805 aaKnown RBP11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 TMEM39BQ9GZU3 492 aa11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 ZNF70Q9UC06 446 aaPredicted RBP11.82□□□□□ -0.52
UBE2D3-205ENST00000350435 TCP10L2B9ZVM9 353 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 ADGRE1Q14246 886 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 SPDYE2Q495Y8 402 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 CCDC152Q4G0S7 254 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 ERMP1Q7Z2K6 904 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 COL26A1Q96A83 441 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 ATP11BQ9Y2G3 1177 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 BAHCC1Q9P281 2608 aa11.81□□□□□ -0.52
UBE2D3-205ENST00000350435 ERC2O15083 957 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 ANXA1P04083 346 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 HSP90B1P14625 803 aaKnown RBP11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 ITGB8P26012 769 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 PRKAR2BP31323 418 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 EIF4G2P78344 907 aaKnown RBP eCLIP11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 MOGSQ13724 837 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 MICALL1Q8N3F8 863 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 SMCR8Q8TEV9 937 aaPredicted RBP11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 SPTBN4Q9H254 2564 aa11.8□□□□□ -0.52
UBE2D3-205ENST00000350435 EIF2S2P20042 333 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 PDIA6Q15084 440 aa11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 MAP3K21Q5TCX8 1036 aa11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 GPAT2Q6NUI2 795 aa11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 XAGE3Q8WTP9 111 aa11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 HOOK2Q96ED9 719 aa11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 TDRD3Q9H7E2 651 aaKnown RBP11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 RLFQ13129 1914 aa11.79□□□□□ -0.52
UBE2D3-205ENST00000350435 CHD9Q3L8U1 2897 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 PKD1L2Q7Z442 2459 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 HTATSF1O43719 755 aaKnown RBP11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 TLL1O43897 1013 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 LHX8Q68G74 356 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 CCDC129Q6ZRS4 1044 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 TRIB2Q92519 343 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 PLXNB2O15031 1838 aa11.78□□□□□ -0.52
UBE2D3-205ENST00000350435 DCAF15Q66K64 600 aa11.77□□□□□ -0.53
UBE2D3-205ENST00000350435 ANKRD13CQ8N6S4 541 aa11.77□□□□□ -0.53
UBE2D3-205ENST00000350435 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
UBE2D3-205ENST00000350435 LEMD3Q9Y2U8 911 aa11.77□□□□□ -0.53
UBE2D3-205ENST00000350435 KNSTRNQ9Y448 316 aa11.77□□□□□ -0.53
UBE2D3-205ENST00000350435 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
UBE2D3-205ENST00000350435 MKRN4PQ13434 485 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-205ENST00000350435 FASTKD5Q7L8L6 764 aaKnown RBP11.76□□□□□ -0.53
UBE2D3-205ENST00000350435 HERVK_113Q902F9 699 aa11.76□□□□□ -0.53
UBE2D3-205ENST00000350435 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
UBE2D3-205ENST00000350435 MINPP1Q9UNW1 487 aa11.76□□□□□ -0.53
UBE2D3-205ENST00000350435 CXCL11O14625 94 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 GFRA3O60609 400 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 ALADP13716 330 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 FKBP1AP62942 108 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 FAM110CQ1W6H9 321 aa11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 CDC5LQ99459 802 aaKnown RBP11.75□□□□□ -0.53
UBE2D3-205ENST00000350435 ZNF341Q9BYN7 854 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms