RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 CASC4Q6P4E1 433 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 TBC1D31Q96DN5 1066 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 PHF8Q9UPP1 1060 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 POLD1P28340 1107 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 KRBA2Q6ZNG9 492 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 CCDC110Q8TBZ0 833 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 MIPOL1Q8TD10 442 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
CUL3-202ENST00000344951 TUBB4AP04350 444 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 KRT19P08727 400 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 CCDC122Q5T0U0 273 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 KRT79Q5XKE5 535 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 ANKRD24Q8TF21 1146 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 CPA1P15085 419 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 CCDC89Q8N998 374 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 GSDMBQ8TAX9 411 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 CCDC42Q96M95 316 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 STMN4Q9H169 189 aaPredicted RBP16.86■□□□□ 0.29
CUL3-202ENST00000344951 KRT2P35908 639 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 ZNF131P52739 623 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 RUFY3Q7L099 469 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 STMN2Q93045 179 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 CTNND2Q9UQB3 1225 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 GNL1P36915 607 aaPredicted RBP16.86■□□□□ 0.29
CUL3-202ENST00000344951 RNF169Q8NCN4 708 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 MSANTD4Q8NCY6 345 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 DCTPP1Q9H773 170 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 MAPK8IP1Q9UQF2 711 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 PRPHP41219 470 aa16.86■□□□□ 0.29
CUL3-202ENST00000344951 ITIH3Q06033 890 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 SEL1L2Q5TEA6 688 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 ZBTB40Q9NUA8 1239 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 TBC1D7Q9P0N9 293 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 WDR44Q5JSH3 913 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 GBP7Q8N8V2 638 aaPredicted RBP16.85■□□□□ 0.29
CUL3-202ENST00000344951 LMBR1Q8WVP7 490 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 PTPDC1A2A3K4 754 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 TXNDC9O14530 226 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 NLRP3Q96P20 1036 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 C14orf93Q9H972 538 aaKnown RBP16.85■□□□□ 0.29
CUL3-202ENST00000344951 ZNF174Q15697 407 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 LONRF3Q496Y0 759 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
CUL3-202ENST00000344951 PPP1R12CQ9BZL4 782 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 FRMD4BQ9Y2L6 1034 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 SPOPO43791 374 aa16.85■□□□□ 0.29
CUL3-202ENST00000344951 ZC3H12CQ9C0D7 883 aaKnown RBP16.85■□□□□ 0.29
CUL3-202ENST00000344951 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.85■□□□□ 0.29
CUL3-202ENST00000344951 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 FOXD4Q12950 439 aaPredicted RBP16.84■□□□□ 0.29
CUL3-202ENST00000344951 SETDB1Q15047 1291 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 EAPPQ56P03 285 aaPredicted RBP16.84■□□□□ 0.29
CUL3-202ENST00000344951 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 TTC14Q96N46 770 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 AMOTL2Q9Y2J4 779 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 UBAP1LF5GYI3 381 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 EBAG9O00559 213 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 HS2ST1Q7LGA3 356 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 UQCRFS1P1P0C7P4 283 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 CHMLP26374 656 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 SDCCAG8Q86SQ7 713 aaPredicted RBP16.84■□□□□ 0.29
CUL3-202ENST00000344951 STX10O60499 249 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 SPAG1Q07617 926 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 INTS4Q96HW7 963 aaKnown RBP16.84■□□□□ 0.29
CUL3-202ENST00000344951 SAMD15Q9P1V8 674 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 STIM2Q9P246 746 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 RAD51AP2Q09MP3 1159 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 TRPC3Q13507 836 aa16.84■□□□□ 0.29
CUL3-202ENST00000344951 KIF3CO14782 793 aa16.83■□□□□ 0.29
CUL3-202ENST00000344951 EVCP57679 992 aa16.83■□□□□ 0.29
CUL3-202ENST00000344951 KRT83P78385 493 aa16.83■□□□□ 0.29
CUL3-202ENST00000344951 LETM2Q2VYF4 491 aa16.83■□□□□ 0.29
CUL3-202ENST00000344951 FBXO31Q5XUX0 539 aaPredicted RBP16.83■□□□□ 0.29
CUL3-202ENST00000344951 XAGE3Q8WTP9 111 aa16.83■□□□□ 0.29
CUL3-202ENST00000344951 BZW2Q9Y6E2 419 aaKnown RBP16.83■□□□□ 0.29
CUL3-202ENST00000344951 ARID4AP29374 1257 aaPredicted RBP16.83■□□□□ 0.29
CUL3-202ENST00000344951 CACYBPQ9HB71 228 aaKnown RBP16.83■□□□□ 0.29
CUL3-202ENST00000344951 NOP56O00567 594 aaKnown RBP16.83■□□□□ 0.28
CUL3-202ENST00000344951 GIPC1O14908 333 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.83■□□□□ 0.28
CUL3-202ENST00000344951 BEGAINQ9BUH8 593 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 KRT86O43790 486 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 ANKRD13DQ6ZTN6 518 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 CCDC24Q8N4L8 307 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 LPXNO60711 386 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 ALDH3A1P30838 453 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 PPP2R3AQ06190 1150 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 CLUL1Q15846 466 aa16.83■□□□□ 0.28
CUL3-202ENST00000344951 WHAMMQ8TF30 809 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 KIAA0586Q9BVV6 1533 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 A0A1B0GVL5 298 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 HDXQ7Z353 690 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 CABLES1Q8TDN4 633 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 PICK1Q9NRD5 415 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 HMGB2P26583 209 aaKnown RBP16.82■□□□□ 0.28
CUL3-202ENST00000344951 KRT24Q2M2I5 525 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 USH1GQ495M9 461 aa16.82■□□□□ 0.28
CUL3-202ENST00000344951 SH2D4BQ5SQS7 431 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms