RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 STX6O43752 255 aa16.05■□□□□ 0.16
CDC42-202ENST00000344548 MCM5P33992 734 aa16.05■□□□□ 0.16
CDC42-202ENST00000344548 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 PFKFB2O60825 505 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 IL1R1P14778 569 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 GNAT2P19087 354 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
CDC42-202ENST00000344548 C2CD5Q86YS7 1000 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 MASTLQ96GX5 879 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 NAP1L2Q9ULW6 460 aaPredicted RBP16.04■□□□□ 0.16
CDC42-202ENST00000344548 MTMR6Q9Y217 621 aa16.04■□□□□ 0.16
CDC42-202ENST00000344548 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 FBXL16Q8N461 479 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 DDX11Q96FC9 970 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 ZSWIM5Q9P217 1185 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
CDC42-202ENST00000344548 HPS5Q9UPZ3 1129 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 SALL1Q9NSC2 1324 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 MINDY4BA8MYZ0 360 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 ZBTB22O15209 634 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 EVCP57679 992 aa16.03■□□□□ 0.16
CDC42-202ENST00000344548 GZF1Q9H116 711 aaPredicted RBP16.03■□□□□ 0.16
CDC42-202ENST00000344548 KDM4AO75164 1064 aa16.02■□□□□ 0.16
CDC42-202ENST00000344548 ZSCAN22P10073 491 aaPredicted RBP16.02■□□□□ 0.16
CDC42-202ENST00000344548 AKNAD1Q5T1N1 836 aa16.02■□□□□ 0.16
CDC42-202ENST00000344548 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.16
CDC42-202ENST00000344548 GDPD2Q9HCC8 539 aa16.02■□□□□ 0.16
CDC42-202ENST00000344548 LMBRD1Q9NUN5 540 aa16.02■□□□□ 0.16
CDC42-202ENST00000344548 SLX4Q8IY92 1834 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 LDHBP07195 334 aaKnown RBP16.02■□□□□ 0.15
CDC42-202ENST00000344548 ALDH1B1P30837 517 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 BAG6P46379 1132 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 PPARAQ07869 468 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 DZIP1Q86YF9 867 aaKnown RBP16.02■□□□□ 0.15
CDC42-202ENST00000344548 MPNDQ8N594 471 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 NSUN7Q8NE18 718 aaKnown RBP16.02■□□□□ 0.15
CDC42-202ENST00000344548 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 NACAP1Q9BZK3 213 aa16.02■□□□□ 0.15
CDC42-202ENST00000344548 WDR33Q9C0J8 1336 aaKnown RBP16.02■□□□□ 0.15
CDC42-202ENST00000344548 KLF18A0A0U1RQI7 1052 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 TRDNQ13061 729 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 SLC4A8Q2Y0W8 1093 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
CDC42-202ENST00000344548 LARP1BQ659C4 914 aaKnown RBP16.01■□□□□ 0.15
CDC42-202ENST00000344548 CTR9Q6PD62 1173 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 CDC37L1Q7L3B6 337 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 ZKSCAN3Q9BRR0 538 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 MXD3Q9BW11 206 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 TCHHQ07283 1943 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 USP17L12C9JPN9 530 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 USP17L21D6R901 530 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 PRPF40AO75400 957 aaKnown RBP16.01■□□□□ 0.15
CDC42-202ENST00000344548 CYP2D6P10635 497 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 RXRAP19793 462 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 ZNF274Q96GC6 653 aaPredicted RBP16.01■□□□□ 0.15
CDC42-202ENST00000344548 DCP1AQ9NPI6 582 aaPredicted RBP16.01■□□□□ 0.15
CDC42-202ENST00000344548 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
CDC42-202ENST00000344548 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
CDC42-202ENST00000344548 SH2B2O14492 632 aaPredicted RBP16■□□□□ 0.15
CDC42-202ENST00000344548 F13A1P00488 732 aa16■□□□□ 0.15
CDC42-202ENST00000344548 GTF2IP78347 998 aa16■□□□□ 0.15
CDC42-202ENST00000344548 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
CDC42-202ENST00000344548 GSE1Q14687 1217 aa16■□□□□ 0.15
CDC42-202ENST00000344548 FAM173BQ6P4H8 233 aa16■□□□□ 0.15
CDC42-202ENST00000344548 STAG1Q8WVM7 1258 aa16■□□□□ 0.15
CDC42-202ENST00000344548 VPS37CA5D8V6 355 aaPredicted RBP15.99■□□□□ 0.15
CDC42-202ENST00000344548 H0YIN7 160 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 DEKP35659 375 aaKnown RBP15.99■□□□□ 0.15
CDC42-202ENST00000344548 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 DPP8Q6V1X1 898 aaPredicted RBP15.99■□□□□ 0.15
CDC42-202ENST00000344548 MFSD6Q6ZSS7 791 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 TMC4Q7Z404 712 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 FERMT3Q86UX7 667 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 SH3RF3Q8TEJ3 882 aaPredicted RBP15.99■□□□□ 0.15
CDC42-202ENST00000344548 PRDM1O75626 825 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 CERS5Q8N5B7 392 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 TOMM22Q9NS69 142 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 MAST2Q6P0Q8 1798 aa15.99■□□□□ 0.15
CDC42-202ENST00000344548 PTPDC1A2A3K4 754 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 FDPSP14324 419 aaKnown RBP15.98■□□□□ 0.15
CDC42-202ENST00000344548 SPTY2D1Q68D10 685 aaPredicted RBP15.98■□□□□ 0.15
CDC42-202ENST00000344548 MYL10Q9BUA6 226 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 LY9Q9HBG7 655 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 ANAPC4Q9UJX5 808 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 ANGEL1Q9UNK9 670 aaKnown RBP15.98■□□□□ 0.15
CDC42-202ENST00000344548 QSER1Q2KHR3 1735 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 UTRNP46939 3433 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 GOLGA8BA8MQT2 603 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 FOSBP53539 338 aa15.98■□□□□ 0.15
CDC42-202ENST00000344548 RTFDC1Q9BY42 306 aaPredicted RBP15.98■□□□□ 0.15
CDC42-202ENST00000344548 ZC3H12CQ9C0D7 883 aaKnown RBP15.98■□□□□ 0.15
CDC42-202ENST00000344548 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
CDC42-202ENST00000344548 MYH2Q9UKX2 1941 aa15.97■□□□□ 0.15
CDC42-202ENST00000344548 USP17L8P0C7I0 530 aa15.97■□□□□ 0.15
CDC42-202ENST00000344548 C7orf43Q8WVR3 580 aa15.97■□□□□ 0.15
CDC42-202ENST00000344548 CNPY2Q9Y2B0 182 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms