RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 CCDC129Q6ZRS4 1044 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 RIPOR2Q9Y4F9 1068 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 SGSM2O43147 1006 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 IDH1O75874 414 aaKnown RBP12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 CAGE1Q8TC20 777 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 RABEP2Q9H5N1 569 aa12.12□□□□□ -0.47
CAPRIN1-201ENST00000341394 ST5P78524 1137 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 DNAI1Q9UI46 699 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 RBM8AQ9Y5S9 174 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 F13A1P00488 732 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 ENOX2Q16206 610 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 CCAR1Q8IX12 1150 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 RASEFQ8IZ41 740 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 VGLL2Q8N8G2 317 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 RGS17Q9UGC6 210 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 NRBP1Q9UHY1 535 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 IQSEC3Q9UPP2 1182 aaPredicted RBP12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 TNRC6CQ9HCJ0 1690 aaKnown RBP12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 TYRO3Q06418 890 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 NFIXQ14938 502 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 AOPEPQ8N6M6 819 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 KIF18AQ8NI77 898 aa12.11□□□□□ -0.47
CAPRIN1-201ENST00000341394 LRP5O75197 1615 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 FAM170AA1A519 330 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 TPM1P09493 284 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 ATP5JP18859 108 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 EN1Q05925 392 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 NMIQ13287 307 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 LRRFIP1Q32MZ4 808 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 LSG1Q9H089 658 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 FBXO3Q9UK99 471 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 A0A1B0GUL6 1792 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 ANKIB1Q9P2G1 1089 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 PDE8BO95263 885 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 NCOA5Q9HCD5 579 aaKnown RBP12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 PAG1Q9NWQ8 432 aa12.1□□□□□ -0.47
CAPRIN1-201ENST00000341394 SERPINB2P05120 415 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 ADRA2BP18089 450 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 RPS8P62241 208 aaKnown RBP12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 MCM6Q14566 821 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 COL24A1Q17RW2 1714 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 PUM3Q15397 648 aaKnown RBP12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 HINFPQ9BQA5 517 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 CCDC94Q9BW85 323 aaPredicted RBP12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 PYCARDQ9ULZ3 195 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 TMCO3Q6UWJ1 677 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 GPR108Q9NPR9 543 aa12.09□□□□□ -0.47
CAPRIN1-201ENST00000341394 MROH5Q6ZUA9 1318 aa12.08□□□□□ -0.47
CAPRIN1-201ENST00000341394 SYT10Q6XYQ8 523 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 GNL3LQ9NVN8 582 aaKnown RBP12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 H0YHG0 523 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 LMAN1P49257 510 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 CHRNDQ07001 517 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 SAFBQ15424 915 aaKnown RBP eCLIP12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 TAF3Q5VWG9 929 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 IPO4Q8TEX9 1081 aaKnown RBP12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 A0A1B0GVL5 298 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 IPO7O95373 1038 aaKnown RBP12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 LPIN2Q92539 896 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZNF396Q96N95 335 aaPredicted RBP12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 ABCF2Q9UG63 623 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 CFAP45Q9UL16 551 aa12.08□□□□□ -0.48
CAPRIN1-201ENST00000341394 JAK2O60674 1132 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 BAG6P46379 1132 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 CAVIN4Q5BKX8 364 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 MICU3Q86XE3 530 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 HAUS7Q99871 368 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.07□□□□□ -0.483e-13■□□□□ 8.9
CAPRIN1-201ENST00000341394 SCAND2PQ9GZW5 306 aaPredicted RBP12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 PARP3Q9Y6F1 533 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 RAD50Q92878 1312 aa12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 CELF1Q92879 486 aaKnown RBP12.07□□□□□ -0.48
CAPRIN1-201ENST00000341394 GNG11P61952 73 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 KARSQ15046 597 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 NLGN1Q8N2Q7 840 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 FAM200AQ8TCP9 573 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 G3V3G9 751 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZAP70P43403 619 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 SPECC1Q5M775 1068 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 DCAF8Q5TAQ9 597 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 RAI14Q9P0K7 980 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 LRP2BPQ9P2M1 347 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 MYH7P12883 1935 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 UQCRFS1P1P0C7P4 283 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 GYS1P13807 737 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 MCAMP43121 646 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 APOBRQ0VD83 1088 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 ELF2Q15723 593 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 EZH2Q15910 746 aaKnown RBP12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 CDC37L1Q7L3B6 337 aa12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 ZSCAN31Q96LW9 406 aaPredicted RBP12.06□□□□□ -0.48
CAPRIN1-201ENST00000341394 CCDC69A6NI79 296 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms