RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 LDHBP07195 334 aaKnown RBP21.11■□□□□ 0.97
BRCC3-202ENST00000340647 ZBTB48P10074 688 aaPredicted RBP21.11■□□□□ 0.97
BRCC3-202ENST00000340647 IREB2P48200 963 aaKnown RBP21.11■□□□□ 0.97
BRCC3-202ENST00000340647 ZFPM1Q8IX07 1006 aa21.11■□□□□ 0.97
BRCC3-202ENST00000340647 PTPN18Q99952 460 aa21.11■□□□□ 0.97
BRCC3-202ENST00000340647 CFHR5Q9BXR6 569 aa21.11■□□□□ 0.97
BRCC3-202ENST00000340647 HMG20BQ9P0W2 317 aa21.11■□□□□ 0.97
BRCC3-202ENST00000340647 AKAP2Q9Y2D5 859 aa21.11■□□□□ 0.97
BRCC3-202ENST00000340647 RFX7Q2KHR2 1363 aa21.1■□□□□ 0.97
BRCC3-202ENST00000340647 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
BRCC3-202ENST00000340647 GAKO14976 1311 aa21.1■□□□□ 0.97
BRCC3-202ENST00000340647 TNNI2P48788 182 aa21.1■□□□□ 0.97
BRCC3-202ENST00000340647 ITPRIPQ8IWB1 547 aa21.1■□□□□ 0.97
BRCC3-202ENST00000340647 MS4A4AQ96JQ5 239 aa21.1■□□□□ 0.97
BRCC3-202ENST00000340647 ELP3Q9H9T3 547 aa21.1■□□□□ 0.97
BRCC3-202ENST00000340647 DOCK2Q92608 1830 aa21.09■□□□□ 0.97
BRCC3-202ENST00000340647 ARID4AP29374 1257 aaPredicted RBP21.09■□□□□ 0.97
BRCC3-202ENST00000340647 G3BP1Q13283 466 aaKnown RBP eCLIP21.09■□□□□ 0.97
BRCC3-202ENST00000340647 VGLL4Q14135 290 aa21.09■□□□□ 0.97
BRCC3-202ENST00000340647 IFNL1Q8IU54 200 aa21.09■□□□□ 0.97
BRCC3-202ENST00000340647 FTSJ3Q8IY81 847 aaKnown RBP21.09■□□□□ 0.97
BRCC3-202ENST00000340647 NEUROD6Q96NK8 337 aa21.09■□□□□ 0.97
BRCC3-202ENST00000340647 NOP58Q9Y2X3 529 aaKnown RBP21.09■□□□□ 0.97
BRCC3-202ENST00000340647 CDK5RAP2Q96SN8 1893 aa21.09■□□□□ 0.97
BRCC3-202ENST00000340647 TESPA1A2RU30 521 aaPredicted RBP21.08■□□□□ 0.97
BRCC3-202ENST00000340647 MCAMP43121 646 aa21.08■□□□□ 0.97
BRCC3-202ENST00000340647 MAP3K9P80192 1104 aa21.08■□□□□ 0.97
BRCC3-202ENST00000340647 MVPQ14764 893 aaKnown RBP21.08■□□□□ 0.97
BRCC3-202ENST00000340647 ZNF296Q8WUU4 475 aaPredicted RBP21.08■□□□□ 0.97
BRCC3-202ENST00000340647 OPTNQ96CV9 577 aa21.08■□□□□ 0.97
BRCC3-202ENST00000340647 HTTP42858 3142 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 MANSC4A6NHS7 340 aaPredicted RBP21.07■□□□□ 0.96
BRCC3-202ENST00000340647 SREBF2Q12772 1141 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 CEP85Q6P2H3 762 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 TBC1D9Q6ZT07 1266 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 FAM151AQ8WW52 585 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 FAM163AQ96GL9 167 aaPredicted RBP21.07■□□□□ 0.96
BRCC3-202ENST00000340647 USP40Q9NVE5 1235 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 SNCAIPQ9Y6H5 919 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 ATRNL1Q5VV63 1379 aa21.07■□□□□ 0.96
BRCC3-202ENST00000340647 PDE4DIPQ5VU43 2346 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 GPR25O00155 361 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 SLURP2P0DP57 97 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 TCP10Q12799 353 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 TNNI3KQ59H18 835 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 NOM1Q5C9Z4 860 aaKnown RBP21.06■□□□□ 0.96
BRCC3-202ENST00000340647 MIGA2Q7L4E1 593 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 SH3BP5LQ7L8J4 393 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 DBNDD2Q9BQY9 259 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 GPR108Q9NPR9 543 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 ABCF2Q9UG63 623 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 FPGT-TNNI3KV9GXZ4 949 aa21.06■□□□□ 0.96
BRCC3-202ENST00000340647 SURF6O75683 361 aaKnown RBP21.05■□□□□ 0.96
BRCC3-202ENST00000340647 SOX10P56693 466 aa21.05■□□□□ 0.96
BRCC3-202ENST00000340647 CAP1Q01518 475 aa21.05■□□□□ 0.96
BRCC3-202ENST00000340647 MECOMQ03112 1051 aa21.05■□□□□ 0.96
BRCC3-202ENST00000340647 SPATA5Q8NB90 893 aa21.05■□□□□ 0.96
BRCC3-202ENST00000340647 ZKSCAN4Q969J2 545 aaPredicted RBP21.05■□□□□ 0.96
BRCC3-202ENST00000340647 DDX4Q9NQI0 724 aaKnown RBP21.05■□□□□ 0.96
BRCC3-202ENST00000340647 TMOD2Q9NZR1 351 aa21.05■□□□□ 0.96
BRCC3-202ENST00000340647 WDHD1O75717 1129 aaPredicted RBP21.04■□□□□ 0.96
BRCC3-202ENST00000340647 INHBEP58166 350 aa21.04■□□□□ 0.96
BRCC3-202ENST00000340647 RHBDL3P58872 404 aa21.04■□□□□ 0.96
BRCC3-202ENST00000340647 ZGPATQ8N5A5 531 aaKnown RBP21.04■□□□□ 0.96
BRCC3-202ENST00000340647 IDI2Q9BXS1 227 aa21.04■□□□□ 0.96
BRCC3-202ENST00000340647 TLR7Q9NYK1 1049 aaKnown RBP21.04■□□□□ 0.96
BRCC3-202ENST00000340647 ZNF112Q9UJU3 913 aa21.04■□□□□ 0.96
BRCC3-202ENST00000340647 PHIPQ8WWQ0 1821 aa21.04■□□□□ 0.96
BRCC3-202ENST00000340647 MAST2Q6P0Q8 1798 aa21.03■□□□□ 0.96
BRCC3-202ENST00000340647 INPP5BP32019 993 aa21.03■□□□□ 0.96
BRCC3-202ENST00000340647 BRI3BPQ8WY22 251 aa21.03■□□□□ 0.96
BRCC3-202ENST00000340647 NSUN4Q96CB9 384 aaKnown RBP21.03■□□□□ 0.96
BRCC3-202ENST00000340647 EAF2Q96CJ1 260 aaPredicted RBP21.03■□□□□ 0.96
BRCC3-202ENST00000340647 DBNLQ9UJU6 430 aaKnown RBP21.03■□□□□ 0.96
BRCC3-202ENST00000340647 MROH7-TTC4A0A0A0MT08 1334 aa21.03■□□□□ 0.96
BRCC3-202ENST00000340647 SIPA1L1O43166 1804 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 FOCADQ5VW36 1801 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 CENPFP49454 3210 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 GPR75-ASB3A0A0A6YYF3 556 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 SPDYE5A6NIY4 337 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 RGS3P49796 1198 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 CTU1Q7Z7A3 348 aaKnown RBP21.02■□□□□ 0.96
BRCC3-202ENST00000340647 SIRT2Q8IXJ6 389 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 WRNIP1Q96S55 665 aa21.02■□□□□ 0.96
BRCC3-202ENST00000340647 ERICH6Q7L0X2 663 aa21.01■□□□□ 0.95
BRCC3-202ENST00000340647 DZIP1Q86YF9 867 aaKnown RBP21.01■□□□□ 0.95
BRCC3-202ENST00000340647 SNRKQ9NRH2 765 aa21.01■□□□□ 0.95
BRCC3-202ENST00000340647 PTPRFP10586 1907 aa21.01■□□□□ 0.95
BRCC3-202ENST00000340647 ZSWIM8A7E2V4 1837 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 DDTLA6NHG4 134 aaPredicted RBP21■□□□□ 0.95
BRCC3-202ENST00000340647 PHF20L1A8MW92 1017 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 BTDP43251 543 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 MAP3K10Q02779 954 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 CRHR2Q13324 411 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 C20orf194Q5TEA3 1177 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 OTUD5Q96G74 571 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 ZBTB40Q9NUA8 1239 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 COG6Q9Y2V7 657 aa21■□□□□ 0.95
BRCC3-202ENST00000340647 IRF6O14896 467 aa20.99■□□□□ 0.95
BRCC3-202ENST00000340647 ALDH1A1P00352 501 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms