RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 CPLX1O14810 134 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 MFSD6Q6ZSS7 791 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 CCDC82Q8N4S0 544 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 RGL2O15211 777 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 MMP10P09238 476 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 PDCP20941 246 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 GRIK5Q16478 980 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 DZIP1Q86YF9 867 aaKnown RBP11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 SYCE3A1L190 88 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 RBM17Q96I25 401 aaKnown RBP11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZSWIM5Q9P217 1185 aa11.87□□□□□ -0.51
ARHGEF3-202ENST00000338458 IFIT3O14879 490 aaKnown RBP11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 XRCC6P12956 609 aaKnown RBP eCLIP11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 ADD1P35611 737 aaKnown RBP11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZSCAN23Q3MJ62 389 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 TMEM67Q5HYA8 995 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 POTEAQ6S8J7 498 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 ATP6V1DQ9Y5K8 247 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 NSUN4Q96CB9 384 aaKnown RBP11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 XDHP47989 1333 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 AKNAD1Q5T1N1 836 aa11.86□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 PPARAQ07869 468 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZNF274Q96GC6 653 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 AGXT2Q9BYV1 514 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 ANGEL1Q9UNK9 670 aaKnown RBP11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 COL24A1Q17RW2 1714 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 USP17L12C9JPN9 530 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 USP17L21D6R901 530 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 PHKBQ93100 1093 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 AIFM3Q96NN9 605 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 FTOQ9C0B1 505 aaKnown RBP eCLIP11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
ARHGEF3-202ENST00000338458 RANBP6O60518 1105 aaKnown RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 CYP2D6P10635 497 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 GNAT2P19087 354 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 EZH2Q15910 746 aaKnown RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 POLLQ9UGP5 575 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 F8W031 263 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 UBE2Q2LH0YL09 131 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 METAP2P50579 478 aaKnown RBP eCLIP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 RGS17Q9UGC6 210 aaPredicted RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 PNPLA7Q6ZV29 1317 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 LDHBP07195 334 aaKnown RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 NLGN1Q8N2Q7 840 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 LEMD3Q9Y2U8 911 aa11.84□□□□□ -0.51
ARHGEF3-202ENST00000338458 MYH13Q9UKX3 1938 aa11.83□□□□□ -0.51
ARHGEF3-202ENST00000338458 SH2B2O14492 632 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 PLSCR1O15162 318 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 FDPSP14324 419 aaKnown RBP11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 KRT85P78386 507 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 ALX1Q15699 326 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 CRY2Q49AN0 593 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 TTC6Q86TZ1 520 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 SMARCC2Q8TAQ2 1214 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 CCDC69A6NI79 296 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 RNF214Q8ND24 703 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 RTN4Q9NQC3 1192 aaKnown RBP11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 FSD2A1L4K1 749 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 MBD3O95983 291 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 CDC27P30260 824 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
ARHGEF3-202ENST00000338458 BAZ2AQ9UIF9 1905 aaKnown RBP11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 GOLGA8AA7E2F4 631 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 PPEF1O14829 653 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 DOK7Q18PE1 504 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 APOA5Q6Q788 366 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 IGDCC4Q8TDY8 1250 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 PDGFDQ9GZP0 370 aaPredicted RBP11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 SEMA3EO15041 775 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 ZBTB43O43298 467 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 HMGN5P82970 282 aaKnown RBP11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 SPATA32Q96LK8 384 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 LLPHQ9BRT6 129 aaKnown RBP11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 LY9Q9HBG7 655 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 MCM9Q9NXL9 1143 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 A0A1B0GUL6 1792 aa11.82□□□□□ -0.52
ARHGEF3-202ENST00000338458 DOCK2Q92608 1830 aa11.81□□□□□ -0.52
ARHGEF3-202ENST00000338458 ERICH2A1L162 156 aa11.81□□□□□ -0.52
ARHGEF3-202ENST00000338458 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
ARHGEF3-202ENST00000338458 USP17L8P0C7I0 530 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 287.2 ms