RNA–Protein interactions for RNA: ENST00000335922.9

FGFR1-202, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 4,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-202ENST00000335922 PDE4BQ07343 736 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 CENPHQ9H3R5 247 aa16.74■□□□□ 0.27
FGFR1-202ENST00000335922 NCOA3Q9Y6Q9 1424 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 PUM3Q15397 648 aaKnown RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 ERCC6LQ2NKX8 1250 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 LARGE2Q8N3Y3 721 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 CDK5RAP3Q96JB5 506 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 GREM2Q9H772 168 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 TRMT1LQ7Z2T5 733 aaKnown RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 KCNG4Q8TDN1 519 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 MED14O60244 1454 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 B4E1Z4 1266 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 RNF113AO15541 343 aaKnown RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 CTSWP56202 376 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 BBXQ8WY36 941 aaPredicted RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 EYA3Q99504 573 aa16.73■□□□□ 0.27
FGFR1-202ENST00000335922 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.73■□□□□ 0.27
FGFR1-202ENST00000335922 MAGEB6P1A0A0J9YX57 407 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 KIF2AO00139 706 aaPredicted RBP16.72■□□□□ 0.27
FGFR1-202ENST00000335922 PUS3Q9BZE2 481 aaKnown RBP16.72■□□□□ 0.27
FGFR1-202ENST00000335922 ATG3Q9NT62 314 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 ZBTB43O43298 467 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 ZSCAN12O43309 604 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 PHACTR2O75167 634 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 PUF60Q9UHX1 559 aaKnown RBP16.72■□□□□ 0.27
FGFR1-202ENST00000335922 SSH2Q76I76 1423 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 hCG_1642624A0A1W2PR95 340 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 MBD4O95243 580 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 SSRP1Q08945 709 aaKnown RBP16.72■□□□□ 0.27
FGFR1-202ENST00000335922 NECTIN1Q15223 517 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 ZBTB38Q8NAP3 1195 aaPredicted RBP16.72■□□□□ 0.27
FGFR1-202ENST00000335922 SMARCE1Q969G3 411 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
FGFR1-202ENST00000335922 CAVIN2O95810 425 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 CHMP4BP1P59074 171 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 EPHA10Q5JZY3 1008 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
FGFR1-202ENST00000335922 KBTBD3Q8NAB2 608 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 E7EWF7 191 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 ZNF76P36508 570 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 GSTO1P78417 241 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 CATIPQ7Z7H3 387 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 TRMT44Q8IYL2 757 aaKnown RBP16.71■□□□□ 0.27
FGFR1-202ENST00000335922 TTC14Q96N46 770 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 JCADQ9P266 1359 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 GYG1P46976 350 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 LMAN1P49257 510 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 SEC63Q9UGP8 760 aaKnown RBP16.71■□□□□ 0.27
FGFR1-202ENST00000335922 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
FGFR1-202ENST00000335922 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 ZNF397Q8NF99 534 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 CARD6Q9BX69 1037 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 SEC31BQ9NQW1 1179 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 FRMPD1Q5SYB0 1578 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 CDC42BPGQ6DT37 1551 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 ZNF202O95125 648 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 CCDC150Q8NCX0 1101 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 STAMQ92783 540 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 ADD1P35611 737 aaKnown RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 ZAP70P43403 619 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 ZNF827Q17R98 1081 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 DHX58Q96C10 678 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 OGFRQ9NZT2 677 aa16.7■□□□□ 0.26
FGFR1-202ENST00000335922 SAP30BPQ9UHR5 308 aaKnown RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 THRAP3Q9Y2W1 955 aaKnown RBP16.7■□□□□ 0.26
FGFR1-202ENST00000335922 ERLIN1O75477 346 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 ENOX2Q16206 610 aaKnown RBP16.69■□□□□ 0.26
FGFR1-202ENST00000335922 HLFQ16534 295 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 PI16Q6UXB8 463 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 NLGN1Q8N2Q7 840 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 PRDM1O75626 825 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 NDUFA8P51970 172 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 POLA2Q14181 598 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 LRRC8AQ8IWT6 810 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 PGBD1Q96JS3 809 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 CPSF1Q10570 1443 aaKnown RBP16.69■□□□□ 0.26
FGFR1-202ENST00000335922 PCCAP05165 728 aaPredicted RBP16.69■□□□□ 0.26
FGFR1-202ENST00000335922 TSPY3P0CV98 308 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 TSPY8P0CW00 308 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 TXLNAP40222 546 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 LPIN2Q92539 896 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 NUP88Q99567 741 aaPredicted RBP16.69■□□□□ 0.26
FGFR1-202ENST00000335922 KAT14Q9H8E8 782 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 DACH1Q9UI36 760 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 PCDHA7Q9UN72 937 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 CLIC4Q9Y696 253 aa16.69■□□□□ 0.26
FGFR1-202ENST00000335922 RBM6P78332 1123 aaKnown RBP16.68■□□□□ 0.26
FGFR1-202ENST00000335922 FANCCQ00597 558 aa16.68■□□□□ 0.26
FGFR1-202ENST00000335922 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
FGFR1-202ENST00000335922 SERPINB2P05120 415 aa16.68■□□□□ 0.26
FGFR1-202ENST00000335922 DPCR1Q3MIW9 517 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms