RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 FOXP2O15409 715 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 GRIN3BO60391 1043 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 TNIP1Q15025 636 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 DAGLAQ9Y4D2 1042 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 TIAM2Q8IVF5 1701 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 MCM2P49736 904 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 C9orf131Q5VYM1 1079 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 SLF2Q8IX21 1173 aa22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 FAM163AQ96GL9 167 aaPredicted RBP22.38■■□□□ 1.17
EXOSC3-201ENST00000327304 HSPD1P10809 573 aaKnown RBP22.37■■□□□ 1.17
EXOSC3-201ENST00000327304 PRKAB2O43741 272 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 BTDP43251 543 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 AGBL3Q8NEM8 1001 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 MAP4K1Q92918 833 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 KCNB2Q92953 911 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 CHMP5Q9NZZ3 219 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 GJA3Q9Y6H8 435 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 GPR75-ASB3A0A0A6YYF3 556 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 DDIT3P35638 169 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 CRKP46108 304 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 SPRYD3Q8NCJ5 442 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 TEKT1Q969V4 418 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 PCDHAC2Q9Y5I4 1007 aa22.36■■□□□ 1.17
EXOSC3-201ENST00000327304 NEK4P51957 841 aa22.35■■□□□ 1.17
EXOSC3-201ENST00000327304 PPP4CP60510 307 aa22.35■■□□□ 1.17
EXOSC3-201ENST00000327304 HHIPL2Q6UWX4 724 aa22.35■■□□□ 1.17
EXOSC3-201ENST00000327304 DSCC1Q9BVC3 393 aa22.35■■□□□ 1.17
EXOSC3-201ENST00000327304 RBM8AQ9Y5S9 174 aaKnown RBP22.35■■□□□ 1.17
EXOSC3-201ENST00000327304 HDLBPQ00341 1268 aaKnown RBP22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 NBR1Q14596 966 aa22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 SH3RF3Q8TEJ3 882 aaPredicted RBP22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 NOL10Q9BSC4 688 aaKnown RBP22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 CIZ1Q9ULV3 898 aaPredicted RBP22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 SNX14Q9Y5W7 946 aa22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 SLC4A4Q9Y6R1 1079 aa22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 MRIQ9BWK5 157 aa22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 SERPINA10Q9UK55 444 aa22.34■■□□□ 1.17
EXOSC3-201ENST00000327304 SHTN1A0MZ66 631 aa22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 GSG1L2A8MUP6 293 aa22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 BAG3O95817 575 aa22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 GMPSP49915 693 aaPredicted RBP22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 NECTIN1Q15223 517 aa22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 SDR42E1Q8WUS8 393 aa22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 ZDHHC15Q96MV8 337 aa22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 EPB41L4AQ9HCS5 686 aaPredicted RBP22.33■■□□□ 1.16
EXOSC3-201ENST00000327304 USP17L8P0C7I0 530 aa22.32■■□□□ 1.16
EXOSC3-201ENST00000327304 GNAT2P19087 354 aa22.32■■□□□ 1.16
EXOSC3-201ENST00000327304 NFKBIBQ15653 356 aa22.32■■□□□ 1.16
EXOSC3-201ENST00000327304 APOBEC3HQ6NTF7 200 aaKnown RBP22.32■■□□□ 1.16
EXOSC3-201ENST00000327304 PATL2C9JE40 543 aaKnown RBP22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 APPP05067 770 aa22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 RPS12P25398 132 aaKnown RBP22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 RBM5P52756 815 aaKnown RBP eCLIP22.31■■□□□ 1.161e-14■■■■■ 51.6
EXOSC3-201ENST00000327304 RHBDL3P58872 404 aa22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 CFAP100Q494V2 611 aa22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 CRNKL1Q9BZJ0 848 aaKnown RBP22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 HDAC9Q9UKV0 1011 aa22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 U3KPZ7 1027 aaPredicted RBP22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 OGFOD1Q8N543 542 aa22.31■■□□□ 1.16
EXOSC3-201ENST00000327304 FGAP02671 866 aa22.3■■□□□ 1.16
EXOSC3-201ENST00000327304 GPC2Q8N158 579 aa22.3■■□□□ 1.16
EXOSC3-201ENST00000327304 TM6SF1Q9BZW5 370 aa22.3■■□□□ 1.16
EXOSC3-201ENST00000327304 TEX11Q8IYF3 940 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 RASEFQ8IZ41 740 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 IFNL3Q8IZI9 196 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 CDK5RAP2Q96SN8 1893 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 PLCG2P16885 1265 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 ZKSCAN1P17029 563 aaPredicted RBP22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 CREB3L3Q68CJ9 461 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 CDC42EP5Q6NZY7 148 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 DPF2Q92785 391 aa22.29■■□□□ 1.16
EXOSC3-201ENST00000327304 SLC27A2O14975 620 aa22.28■■□□□ 1.16
EXOSC3-201ENST00000327304 ZNF280AP59817 542 aaPredicted RBP22.28■■□□□ 1.16
EXOSC3-201ENST00000327304 ALX1Q15699 326 aa22.28■■□□□ 1.16
EXOSC3-201ENST00000327304 USP40Q9NVE5 1235 aa22.28■■□□□ 1.16
EXOSC3-201ENST00000327304 TAF6LQ9Y6J9 622 aa22.28■■□□□ 1.16
EXOSC3-201ENST00000327304 RPAP1Q9BWH6 1393 aaPredicted RBP22.28■■□□□ 1.16
EXOSC3-201ENST00000327304 MICALL2Q8IY33 904 aa22.27■■□□□ 1.16
EXOSC3-201ENST00000327304 PRMT6Q96LA8 375 aaPredicted RBP22.27■■□□□ 1.16
EXOSC3-201ENST00000327304 SPDYE2BA6NHP3 402 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 DDNO94850 711 aaPredicted RBP22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 SPDYE6P0CI01 402 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 TDO2P48775 406 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 DLGAP5Q15398 846 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 TGFBRAP1Q8WUH2 860 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 NACAP1Q9BZK3 213 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 NAPBQ9H115 298 aa22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 DCP1AQ9NPI6 582 aaPredicted RBP22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 CNOT7Q9UIV1 285 aaKnown RBP22.27■■□□□ 1.15
EXOSC3-201ENST00000327304 BAZ2AQ9UIF9 1905 aaKnown RBP22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 ZMYM6O95789 1325 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 CYP21A2P08686 494 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 USP5P45974 858 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 TSGA10IPQ3SY00 556 aa22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 UPF3BQ9BZI7 483 aaKnown RBP22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 CWC22Q9HCG8 908 aaKnown RBP22.26■■□□□ 1.15
EXOSC3-201ENST00000327304 MYOZ2Q9NPC6 264 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms