RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 KIAA0825Q8IV33 1275 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 LPIN2Q92539 896 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 FAM227BQ96M60 508 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
ABCF1-201ENST00000326195 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
ABCF1-201ENST00000326195 FIBPO43427 364 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 BBOX1O75936 387 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 GLRX3O76003 335 aaKnown RBP12.05□□□□□ -0.48
ABCF1-201ENST00000326195 RAD51AP2Q09MP3 1159 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 LUZP1Q86V48 1076 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 TBC1D16Q8TBP0 767 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 TMX1Q9H3N1 280 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 AFDNP55196 1824 aaKnown RBP12.05□□□□□ -0.48
ABCF1-201ENST00000326195 MCAMP43121 646 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 ANAPC15P60006 121 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 RASGRF1Q13972 1273 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 ELF2Q15723 593 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
ABCF1-201ENST00000326195 ARFGEF2Q9Y6D5 1785 aa12.04□□□□□ -0.48
ABCF1-201ENST00000326195 GTF3C6Q969F1 213 aa12.04□□□□□ -0.48
ABCF1-201ENST00000326195 FAM84BQ96KN1 310 aaPredicted RBP12.04□□□□□ -0.48
ABCF1-201ENST00000326195 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
ABCF1-201ENST00000326195 CYP2C19P33261 490 aa12.04□□□□□ -0.48
ABCF1-201ENST00000326195 DIXDC1Q155Q3 683 aa12.04□□□□□ -0.48
ABCF1-201ENST00000326195 RPAP1Q9BWH6 1393 aaPredicted RBP12.04□□□□□ -0.48
ABCF1-201ENST00000326195 MROH5Q6ZUA9 1318 aa12.04□□□□□ -0.48
ABCF1-201ENST00000326195 CASTP20810 708 aaKnown RBP12.03□□□□□ -0.48
ABCF1-201ENST00000326195 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 ZNF397Q8NF99 534 aaPredicted RBP12.03□□□□□ -0.48
ABCF1-201ENST00000326195 JAKMIP1Q96N16 626 aaKnown RBP12.03□□□□□ -0.48
ABCF1-201ENST00000326195 PXDNLA1KZ92 1463 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 PRDX5P30044 214 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 ZSCAN25Q6NSZ9 544 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
ABCF1-201ENST00000326195 PAG1Q9NWQ8 432 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 XDHP47989 1333 aa12.03□□□□□ -0.48
ABCF1-201ENST00000326195 GRIK5Q16478 980 aa12.02□□□□□ -0.48
ABCF1-201ENST00000326195 TPD52L1Q16890 204 aaPredicted RBP12.02□□□□□ -0.48
ABCF1-201ENST00000326195 GNL3LQ9NVN8 582 aaKnown RBP12.02□□□□□ -0.48
ABCF1-201ENST00000326195 HMG20BQ9P0W2 317 aa12.02□□□□□ -0.48
ABCF1-201ENST00000326195 CCDC144BQ3MJ40 725 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 CCDC144CPQ8IYA2 1237 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 MAGEB6Q8N7X4 407 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 ANKRD2Q9GZV1 360 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 TOMM22Q9NS69 142 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 CYP46A1Q9Y6A2 500 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 GYS2P54840 703 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 UBE2HP62256 183 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 CAMK4Q16566 473 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 CRY2Q49AN0 593 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 TTLL5Q6EMB2 1281 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 SPATA5Q8NB90 893 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 LRRN4CLQ8ND94 238 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 INTS4Q96HW7 963 aaKnown RBP12.02□□□□□ -0.49
ABCF1-201ENST00000326195 PIH1D3Q9NQM4 214 aaKnown RBP12.02□□□□□ -0.49
ABCF1-201ENST00000326195 CACNA1FO60840 1977 aa12.02□□□□□ -0.49
ABCF1-201ENST00000326195 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-201ENST00000326195 KCNA3P22001 575 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 CACNB3P54284 484 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 CEP135Q66GS9 1140 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 NEK11Q8NG66 645 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 NOL10Q9BSC4 688 aaKnown RBP12.01□□□□□ -0.49
ABCF1-201ENST00000326195 LAMB4A4D0S4 1761 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 TRIM66O15016 1216 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 CHRM1P11229 460 aaPredicted RBP12.01□□□□□ -0.49
ABCF1-201ENST00000326195 HAND2P61296 217 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 MFSD14BQ5SR56 506 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 PI4K2BQ8TCG2 481 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 IL25Q9H293 177 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 LCMT1Q9UIC8 334 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 PAXBP1Q9Y5B6 917 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 CIAO1O76071 339 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 TEX2Q8IWB9 1127 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 CCDC83Q8IWF9 413 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 DRC7Q8IY82 874 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 PDRG1Q9NUG6 133 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 RSPH14Q9UHP6 348 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 LIMCH1Q9UPQ0 1083 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 PCDHAC2Q9Y5I4 1007 aa12.01□□□□□ -0.49
ABCF1-201ENST00000326195 COL4A1P02462 1669 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 GOLGA6L6A8MZA4 724 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 TPM3P06753 285 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
ABCF1-201ENST00000326195 JDP2Q8WYK2 163 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 ZKSCAN7Q9P0L1 754 aaPredicted RBP12□□□□□ -0.49
ABCF1-201ENST00000326195 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 LY75O60449 1722 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 NMIQ13287 307 aaPredicted RBP12□□□□□ -0.49
ABCF1-201ENST00000326195 SP8Q8IXZ3 490 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 VGLL2Q8N8G2 317 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 CD209Q9NNX6 404 aa12□□□□□ -0.49
ABCF1-201ENST00000326195 CYP7A1P22680 504 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 DNM1Q05193 864 aaKnown RBP11.99□□□□□ -0.49
ABCF1-201ENST00000326195 ZNF804AQ7Z570 1209 aa11.99□□□□□ -0.49
ABCF1-201ENST00000326195 MTMR7Q9Y216 660 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms