RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TAOK3Q9H2K8 898 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 MROH7-TTC4A0A0A0MT08 1334 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 GAKO14976 1311 aa15.16■□□□□ 0.02
DDX39A-202ENST00000324340 USP17L3A6NCW0 530 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 USP17L4A6NCW7 530 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 IARSP41252 1262 aaKnown RBP15.15■□□□□ 0.02
DDX39A-202ENST00000324340 SLC4A3P48751 1232 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
DDX39A-202ENST00000324340 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 USP17L1Q7RTZ2 530 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 IFNL3Q8IZI9 196 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 NAP1L5Q96NT1 182 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-202ENST00000324340 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-202ENST00000324340 PDCL3Q9H2J4 239 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 ZSWIM6Q9HCJ5 1215 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 EPB41L4AQ9HCS5 686 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-202ENST00000324340 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 SLC4A4Q9Y6R1 1079 aa15.15■□□□□ 0.02
DDX39A-202ENST00000324340 GPR75-ASB3A0A0A6YYF3 556 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 NFKBIEO00221 500 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 ST18O60284 1047 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 PTMSP20962 102 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 PSMA5P28066 241 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 DYNLL1P63167 89 aaKnown RBP15.14■□□□□ 0.01
DDX39A-202ENST00000324340 DIXDC1Q155Q3 683 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 MRIQ9BWK5 157 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 KCNQ5Q9NR82 932 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 ZNF277Q9NRM2 450 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-202ENST00000324340 TAF6LQ9Y6J9 622 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 TIAM2Q8IVF5 1701 aa15.14■□□□□ 0.01
DDX39A-202ENST00000324340 PRKAB2O43741 272 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 CD2BP2O95400 341 aaKnown RBP15.13■□□□□ 0.01
DDX39A-202ENST00000324340 BAG3O95817 575 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 APPP05067 770 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 NEK4P51957 841 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 LARGE2Q8N3Y3 721 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 JAKMIP1Q96N16 626 aaKnown RBP15.13■□□□□ 0.01
DDX39A-202ENST00000324340 TTC14Q96N46 770 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 MAP7D2Q96T17 732 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 NACAP1Q9BZK3 213 aa15.13■□□□□ 0.01
DDX39A-202ENST00000324340 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
DDX39A-202ENST00000324340 ZNF213O14771 459 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 XRCC6P12956 609 aaKnown RBP eCLIP15.12■□□□□ 0.01
DDX39A-202ENST00000324340 HDLBPQ00341 1268 aaKnown RBP15.12■□□□□ 0.01
DDX39A-202ENST00000324340 HHIPL2Q6UWX4 724 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 STOX1Q6ZVD7 989 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 HSCBQ8IWL3 235 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 FBXW7Q969H0 707 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 MXD3Q9BW11 206 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 UPF3BQ9BZI7 483 aaKnown RBP15.12■□□□□ 0.01
DDX39A-202ENST00000324340 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
DDX39A-202ENST00000324340 NAPBQ9H115 298 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 ZNRF3Q9ULT6 936 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 CDK5RAP2Q96SN8 1893 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 FOCADQ5VW36 1801 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 MYO3BQ8WXR4 1341 aa15.12■□□□□ 0.01
DDX39A-202ENST00000324340 PLCG2P16885 1265 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 CASTP20810 708 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 MCM2P49736 904 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 NIM1KQ8IY84 436 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 SDR42E1Q8WUS8 393 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 NOL10Q9BSC4 688 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 SYT17Q9BSW7 474 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 ALDH8A1Q9H2A2 487 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 ATP8A2Q9NTI2 1148 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 MKRN1Q9UHC7 482 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 TTF2Q9UNY4 1162 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 DAGLAQ9Y4D2 1042 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 CYP46A1Q9Y6A2 500 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 LAMB1P07942 1786 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 DDX60LQ5H9U9 1706 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 E7EWF7 191 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 K7ELQ4 463 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 VIL1P09327 827 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 HMGB1P09429 215 aaKnown RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 BTDP43251 543 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 BLOC1S2Q6QNY1 142 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 DCP1AQ9NPI6 582 aaPredicted RBP15.11■□□□□ 0.01
DDX39A-202ENST00000324340 ANAPC4Q9UJX5 808 aa15.11■□□□□ 0.01
DDX39A-202ENST00000324340 ADAMTSL1Q8N6G6 1762 aa15.1■□□□□ 0.01
DDX39A-202ENST00000324340 RPS6KB1P23443 525 aa15.1■□□□□ 0.01
DDX39A-202ENST00000324340 TDO2P48775 406 aa15.1■□□□□ 0.01
DDX39A-202ENST00000324340 RHBDL3P58872 404 aa15.1■□□□□ 0.01
DDX39A-202ENST00000324340 SH3RF3Q8TEJ3 882 aaPredicted RBP15.1■□□□□ 0.01
DDX39A-202ENST00000324340 TEKT1Q969V4 418 aa15.1■□□□□ 0.01
DDX39A-202ENST00000324340 GMLQ99445 158 aa15.1■□□□□ 0.01
DDX39A-202ENST00000324340 NAV1Q8NEY1 1877 aa15.09■□□□□ 0.01
DDX39A-202ENST00000324340 F8W031 263 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-202ENST00000324340 HAND2P61296 217 aa15.09■□□□□ 0.01
DDX39A-202ENST00000324340 COL9A3Q14050 684 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-202ENST00000324340 SBK1Q52WX2 424 aa15.09■□□□□ 0.01
DDX39A-202ENST00000324340 RSBN1LQ6PCB5 846 aaPredicted RBP15.09■□□□□ 0.01
DDX39A-202ENST00000324340 ZDHHC15Q96MV8 337 aa15.09■□□□□ 0.01
DDX39A-202ENST00000324340 SERPINA10Q9UK55 444 aa15.09■□□□□ 0.01
DDX39A-202ENST00000324340 BAZ2AQ9UIF9 1905 aaKnown RBP15.08■□□□□ 0.01
DDX39A-202ENST00000324340 ECM29Q5VYK3 1845 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms