RNA–Protein interactions for RNA: ENST00000323926.10

FN1-201, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-201ENST00000323926 PPP1R2P3Q6NXS1 205 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 RAB3IPQ96QF0 476 aaPredicted RBP14.15□□□□□ -0.14
FN1-201ENST00000323926 SEPT6Q14141 434 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 ZSCAN23Q3MJ62 389 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 HEATR3Q7Z4Q2 680 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 KDM3AQ9Y4C1 1321 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 TRIML1Q8N9V2 468 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 MAP3K21Q5TCX8 1036 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 NCAPGQ9BPX3 1015 aa14.15□□□□□ -0.14
FN1-201ENST00000323926 BCRP11274 1271 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 SYT1P21579 422 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 CCDC121Q6ZUS5 278 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 SLC4A4Q9Y6R1 1079 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 ATP10BO94823 1461 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 PDE1AP54750 535 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 ATP8B2P98198 1209 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 FYB2Q5VWT5 728 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 TICAM2Q86XR7 235 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 PPFIBP2Q8ND30 876 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 FAM81BQ96LP2 452 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 ZNF830Q96NB3 372 aaPredicted RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 CACYBPQ9HB71 228 aaKnown RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 KIF3CO14782 793 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 TRIM37O94972 964 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 ZC3H15Q8WU90 426 aaKnown RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 PICK1Q9NRD5 415 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 NEO1Q92859 1461 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 SPINK5Q9NQ38 1064 aaPredicted RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 NKIRAS1Q9NYS0 192 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 FOXO3O43524 673 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 PARP1P09874 1014 aaKnown RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 TMED8Q6PL24 325 aaPredicted RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 RUFY4Q6ZNE9 571 aa14.14□□□□□ -0.15
FN1-201ENST00000323926 CCDC8Q9H0W5 538 aaPredicted RBP14.14□□□□□ -0.15
FN1-201ENST00000323926 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 C19orf44Q9H6X5 657 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 ZNF277Q9NRM2 450 aaPredicted RBP14.13□□□□□ -0.15
FN1-201ENST00000323926 SKILP12757 684 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 TRPC3Q13507 836 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.13□□□□□ -0.158e-28■■■□□ 14.7
FN1-201ENST00000323926 DEXIO95424 95 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 LACTBP83111 547 aaPredicted RBP14.13□□□□□ -0.15
FN1-201ENST00000323926 MXRA7P84157 204 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 SV2BQ7L1I2 683 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 WAPLQ7Z5K2 1190 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 RAB11FIP4Q86YS3 637 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 HAUS1Q96CS2 278 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 RBM17Q96I25 401 aaKnown RBP14.13□□□□□ -0.15
FN1-201ENST00000323926 SBNO1A3KN83 1393 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 MYH7P12883 1935 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 VCX3BQ9H321 246 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 PUM3Q15397 648 aaKnown RBP14.13□□□□□ -0.15
FN1-201ENST00000323926 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
FN1-201ENST00000323926 ANO6Q4KMQ2 910 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 KIF20BQ96Q89 1820 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 ATP10DQ9P241 1426 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 ATP11AP98196 1134 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 TAF12Q16514 161 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 ERICH4A6NGS2 130 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 DDB1Q16531 1140 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 ATP10AO60312 1499 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 GALNT17Q6IS24 598 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 IFT20Q8IY31 132 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 F13A1P00488 732 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 SPATS2Q86XZ4 545 aaKnown RBP14.12□□□□□ -0.15
FN1-201ENST00000323926 TMX3Q96JJ7 454 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 FAM169AQ9Y6X4 670 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 PPP1R7Q15435 360 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 NME9Q86XW9 330 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 CCT6BQ92526 530 aa14.12□□□□□ -0.15
FN1-201ENST00000323926 PFDN6O15212 129 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 RNF113AO15541 343 aaKnown RBP14.11□□□□□ -0.15
FN1-201ENST00000323926 UBXN1Q04323 297 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 MTMR3Q13615 1198 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 CCDC144CPQ8IYA2 1237 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 NUP153P49790 1475 aaKnown RBP14.11□□□□□ -0.15
FN1-201ENST00000323926 FLOT1O75955 427 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 CACNA2D3Q8IZS8 1091 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 MAGEF1Q9HAY2 307 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 RUNDC3BQ96NL0 473 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 PARP3Q9Y6F1 533 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 CIB2O75838 187 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 MNAT1P51948 309 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 CYP26C1Q6V0L0 522 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 NT5C3AQ9H0P0 336 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 RBM8AQ9Y5S9 174 aaKnown RBP14.11□□□□□ -0.15
FN1-201ENST00000323926 MROH5Q6ZUA9 1318 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 LRRC59Q96AG4 307 aaKnown RBP14.11□□□□□ -0.15
FN1-201ENST00000323926 PFDN4Q9NQP4 134 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 CDC42BPGQ6DT37 1551 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 SDSP20132 328 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 STMN2Q93045 179 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 TCHPQ9BT92 498 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 NSMCE1Q8WV22 266 aa14.11□□□□□ -0.15
FN1-201ENST00000323926 ERCC5P28715 1186 aaPredicted RBP14.1□□□□□ -0.15
FN1-201ENST00000323926 RBM10P98175 930 aaKnown RBP14.1□□□□□ -0.15
FN1-201ENST00000323926 PHLDB2Q86SQ0 1253 aa14.1□□□□□ -0.15
FN1-201ENST00000323926 EIF3CLB5ME19 914 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms