RNA–Protein interactions for RNA: ENST00000321442.9

SFXN1-201, Transcript of sideroflexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN1, Length 4,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-201ENST00000321442 CATIPQ7Z7H3 387 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 TAF4BQ92750 862 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 PHKBQ93100 1093 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 SH3TC1Q8TE82 1336 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 SNAP23O00161 211 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
SFXN1-201ENST00000321442 MYL10Q9BUA6 226 aa18.68■□□□□ 0.58
SFXN1-201ENST00000321442 USO1O60763 962 aaKnown RBP18.67■□□□□ 0.58
SFXN1-201ENST00000321442 FRMPD1Q5SYB0 1578 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 SSH2Q76I76 1423 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 TRMT44Q8IYL2 757 aaKnown RBP18.67■□□□□ 0.58
SFXN1-201ENST00000321442 SEPT11Q9NVA2 429 aaKnown RBP18.67■□□□□ 0.58
SFXN1-201ENST00000321442 AKR1B10O60218 316 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 TUBB4AP04350 444 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 MNAT1P51948 309 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 MTX1Q13505 466 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 TPTE2Q6XPS3 522 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 CARD10Q9BWT7 1032 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 RNF41Q9H4P4 317 aaPredicted RBP18.67■□□□□ 0.58
SFXN1-201ENST00000321442 NFE2L3Q9Y4A8 694 aa18.67■□□□□ 0.58
SFXN1-201ENST00000321442 B4E1Z4 1266 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 CCDC43Q96MW1 224 aaKnown RBP18.66■□□□□ 0.58
SFXN1-201ENST00000321442 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.66■□□□□ 0.586e-7■■□□□ 11.5
SFXN1-201ENST00000321442 MYO1BO43795 1136 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 WDHD1O75717 1129 aaPredicted RBP18.66■□□□□ 0.58
SFXN1-201ENST00000321442 CCDC87Q9NVE4 849 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 KIAA1468Q9P260 1216 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 KCNH3Q9ULD8 1083 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 CTDP1Q9Y5B0 961 aaPredicted RBP18.66■□□□□ 0.58
SFXN1-201ENST00000321442 KBTBD3Q8NAB2 608 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 PLCD4Q9BRC7 762 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 RABEP2Q9H5N1 569 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 MAPK8IP1Q9UQF2 711 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 C11orf57Q6ZUT1 292 aaPredicted RBP18.66■□□□□ 0.58
SFXN1-201ENST00000321442 MAGEB6Q8N7X4 407 aa18.66■□□□□ 0.58
SFXN1-201ENST00000321442 BMP2KQ9NSY1 1161 aaPredicted RBP18.66■□□□□ 0.58
SFXN1-201ENST00000321442 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
SFXN1-201ENST00000321442 MCM3P25205 808 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 ADKP55263 362 aaKnown RBP18.65■□□□□ 0.58
SFXN1-201ENST00000321442 MSL1Q68DK7 614 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 ATL3Q6DD88 541 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 NEK11Q8NG66 645 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 XAGE2Q96GT9 111 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 LLPHQ9BRT6 129 aaKnown RBP18.65■□□□□ 0.58
SFXN1-201ENST00000321442 VAT1LQ9HCJ6 419 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 ELP1O95163 1332 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 TRIM75PA6NK02 468 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 POLR2DO15514 142 aaKnown RBP18.65■□□□□ 0.58
SFXN1-201ENST00000321442 CLEC17AQ6ZS10 378 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 CEP112Q8N8E3 955 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 BABAM1Q9NWV8 329 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 TCEAL9Q9UHQ7 104 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 LOC102724428A0A0B4J2F2 783 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 SIK1P57059 783 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 KRI1Q8N9T8 703 aaKnown RBP18.65■□□□□ 0.58
SFXN1-201ENST00000321442 MAP4K1Q92918 833 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 DESI2Q9BSY9 194 aa18.65■□□□□ 0.58
SFXN1-201ENST00000321442 TCIRG1Q13488 830 aa18.64■□□□□ 0.58
SFXN1-201ENST00000321442 LONRF3Q496Y0 759 aa18.64■□□□□ 0.58
SFXN1-201ENST00000321442 ETF1P62495 437 aaKnown RBP18.64■□□□□ 0.57
SFXN1-201ENST00000321442 NAA16Q6N069 864 aaPredicted RBP18.64■□□□□ 0.57
SFXN1-201ENST00000321442 STAMQ92783 540 aa18.64■□□□□ 0.57
SFXN1-201ENST00000321442 ERLIN2O94905 339 aa18.64■□□□□ 0.57
SFXN1-201ENST00000321442 TTF1Q15361 905 aaPredicted RBP18.64■□□□□ 0.57
SFXN1-201ENST00000321442 IGSF22Q8N9C0 903 aa18.64■□□□□ 0.57
SFXN1-201ENST00000321442 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.64■□□□□ 0.57
SFXN1-201ENST00000321442 VPS16Q9H269 839 aa18.64■□□□□ 0.57
SFXN1-201ENST00000321442 STX8Q9UNK0 236 aa18.64■□□□□ 0.57
SFXN1-201ENST00000321442 SLC4A4Q9Y6R1 1079 aa18.64■□□□□ 0.57
SFXN1-201ENST00000321442 CYP2E1P05181 493 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-201ENST00000321442 OAS2P29728 719 aaKnown RBP18.63■□□□□ 0.57
SFXN1-201ENST00000321442 TRAPPC3LQ5T215 181 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 ZNF589Q86UQ0 364 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-201ENST00000321442 CABP5Q9NP86 173 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 CCDC96Q2M329 555 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 CCDC113Q9H0I3 377 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 PCDHA7Q9UN72 937 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 CPSF1Q10570 1443 aaKnown RBP18.63■□□□□ 0.57
SFXN1-201ENST00000321442 KCNQ2O43526 872 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 PI16Q6UXB8 463 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 MICALL1Q8N3F8 863 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 TDRD7Q8NHU6 1098 aaKnown RBP18.63■□□□□ 0.57
SFXN1-201ENST00000321442 MRFAP1L1Q96HT8 127 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 PLIN2Q99541 437 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 MYO6Q9UM54 1294 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 AKR1B15C9JRZ8 316 aaPredicted RBP18.63■□□□□ 0.57
SFXN1-201ENST00000321442 ATP2C2O75185 946 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 PRDM1O75626 825 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 GOLGA8FQ08AF8 430 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 GOLGA8DPQ0D2H9 430 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 PNOCQ13519 176 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 GDAP1L1Q96MZ0 367 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 IMPACTQ9P2X3 320 aa18.63■□□□□ 0.57
SFXN1-201ENST00000321442 E7EWF7 191 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 NLRP12P59046 1061 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 ZAP70P43403 619 aa18.62■□□□□ 0.57
SFXN1-201ENST00000321442 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms