RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 CNKSR2Q8WXI2 1034 aa24.15■■□□□ 1.46
LIME1-201ENST00000309546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.15■■□□□ 1.46
LIME1-201ENST00000309546 RPAP1Q9BWH6 1393 aaPredicted RBP24.15■■□□□ 1.46
LIME1-201ENST00000309546 G3BP1Q13283 466 aaKnown RBP eCLIP24.14■■□□□ 1.45
LIME1-201ENST00000309546 MVPQ14764 893 aaKnown RBP24.14■■□□□ 1.45
LIME1-201ENST00000309546 CDC42EP5Q6NZY7 148 aa24.14■■□□□ 1.45
LIME1-201ENST00000309546 ZGPATQ8N5A5 531 aaKnown RBP24.14■■□□□ 1.45
LIME1-201ENST00000309546 CFHR5Q9BXR6 569 aa24.14■■□□□ 1.45
LIME1-201ENST00000309546 ABCF2Q9UG63 623 aa24.14■■□□□ 1.45
LIME1-201ENST00000309546 FKTNO75072 461 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 TCP10Q12799 353 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 NOM1Q5C9Z4 860 aaKnown RBP24.13■■□□□ 1.45
LIME1-201ENST00000309546 DZIP1Q86YF9 867 aaKnown RBP24.13■■□□□ 1.45
LIME1-201ENST00000309546 ITPRIPQ8IWB1 547 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 HOOK2Q96ED9 719 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 OTUD5Q96G74 571 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 WRNIP1Q96S55 665 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 C1orf115Q9H7X2 142 aa24.13■■□□□ 1.45
LIME1-201ENST00000309546 GORABQ5T7V8 394 aa24.12■■□□□ 1.45
LIME1-201ENST00000309546 DCAF15Q66K64 600 aa24.12■■□□□ 1.45
LIME1-201ENST00000309546 OTUD7BQ6GQQ9 843 aa24.12■■□□□ 1.45
LIME1-201ENST00000309546 USP40Q9NVE5 1235 aa24.12■■□□□ 1.45
LIME1-201ENST00000309546 NFIAQ12857 509 aa24.11■■□□□ 1.45
LIME1-201ENST00000309546 MIGA2Q7L4E1 593 aa24.11■■□□□ 1.45
LIME1-201ENST00000309546 FAM151AQ8WW52 585 aa24.11■■□□□ 1.45
LIME1-201ENST00000309546 SNCAIPQ9Y6H5 919 aa24.1■■□□□ 1.45
LIME1-201ENST00000309546 DOCK2Q92608 1830 aa24.1■■□□□ 1.45
LIME1-201ENST00000309546 PDS5AQ29RF7 1337 aaKnown RBP24.1■■□□□ 1.45
LIME1-201ENST00000309546 ZBTB22O15209 634 aa24.09■■□□□ 1.45
LIME1-201ENST00000309546 OS9Q13438 667 aaPredicted RBP24.09■■□□□ 1.45
LIME1-201ENST00000309546 ZKSCAN4Q969J2 545 aaPredicted RBP24.09■■□□□ 1.45
LIME1-201ENST00000309546 PTPN18Q99952 460 aa24.09■■□□□ 1.45
LIME1-201ENST00000309546 ZNF341Q9BYN7 854 aa24.09■■□□□ 1.45
LIME1-201ENST00000309546 CCL15-CCL14A0A0B4J2E2 113 aa24.08■■□□□ 1.45
LIME1-201ENST00000309546 SPDYE5A6NIY4 337 aa24.08■■□□□ 1.45
LIME1-201ENST00000309546 RLBP1P12271 317 aa24.08■■□□□ 1.45
LIME1-201ENST00000309546 CRHR2Q13324 411 aa24.08■■□□□ 1.45
LIME1-201ENST00000309546 PKN2Q16513 984 aaKnown RBP24.08■■□□□ 1.45
LIME1-201ENST00000309546 CCL15Q16663 113 aa24.08■■□□□ 1.45
LIME1-201ENST00000309546 SPTY2D1Q68D10 685 aaPredicted RBP24.08■■□□□ 1.45
LIME1-201ENST00000309546 HPS5Q9UPZ3 1129 aa24.08■■□□□ 1.45
LIME1-201ENST00000309546 TESPA1A2RU30 521 aaPredicted RBP24.07■■□□□ 1.44
LIME1-201ENST00000309546 GTF2A2P52657 109 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 SOX10P56693 466 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 POLA2Q14181 598 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 PI16Q6UXB8 463 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 ERICH6Q7L0X2 663 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 SLF2Q8IX21 1173 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 BRI3BPQ8WY22 251 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 MS4A4AQ96JQ5 239 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 FAM198AQ9UFP1 575 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 GAKO14976 1311 aa24.07■■□□□ 1.44
LIME1-201ENST00000309546 ATP8B2P98198 1209 aa24.06■■□□□ 1.44
LIME1-201ENST00000309546 MLLT1Q03111 559 aaPredicted RBP24.06■■□□□ 1.44
LIME1-201ENST00000309546 HMG20BQ9P0W2 317 aa24.06■■□□□ 1.44
LIME1-201ENST00000309546 INPP5BP32019 993 aa24.05■■□□□ 1.44
LIME1-201ENST00000309546 BTDP43251 543 aa24.05■■□□□ 1.44
LIME1-201ENST00000309546 RGS3P49796 1198 aa24.05■■□□□ 1.44
LIME1-201ENST00000309546 ERO1BQ86YB8 467 aa24.05■■□□□ 1.44
LIME1-201ENST00000309546 SPATA5Q8NB90 893 aa24.05■■□□□ 1.44
LIME1-201ENST00000309546 SSH3Q8TE77 659 aa24.05■■□□□ 1.44
LIME1-201ENST00000309546 SURF6O75683 361 aaKnown RBP24.04■■□□□ 1.44
LIME1-201ENST00000309546 ARID4AP29374 1257 aaPredicted RBP24.04■■□□□ 1.44
LIME1-201ENST00000309546 RGS19P49795 217 aa24.04■■□□□ 1.44
LIME1-201ENST00000309546 MECOMQ03112 1051 aa24.04■■□□□ 1.44
LIME1-201ENST00000309546 FBXO46Q6PJ61 603 aaPredicted RBP24.04■■□□□ 1.44
LIME1-201ENST00000309546 ZFPM1Q8IX07 1006 aa24.04■■□□□ 1.44
LIME1-201ENST00000309546 MROH7-TTC4A0A0A0MT08 1334 aa24.04■■□□□ 1.44
LIME1-201ENST00000309546 ZBTB7BO15156 539 aaPredicted RBP24.03■■□□□ 1.44
LIME1-201ENST00000309546 TAF1CQ15572 869 aaPredicted RBP24.03■■□□□ 1.44
LIME1-201ENST00000309546 TNNI3KQ59H18 835 aa24.03■■□□□ 1.44
LIME1-201ENST00000309546 TBC1D9Q6ZT07 1266 aa24.03■■□□□ 1.44
LIME1-201ENST00000309546 ZSCAN29Q8IWY8 852 aaPredicted RBP24.03■■□□□ 1.44
LIME1-201ENST00000309546 TRIM17Q9Y577 477 aa24.03■■□□□ 1.44
LIME1-201ENST00000309546 FPGT-TNNI3KV9GXZ4 949 aa24.03■■□□□ 1.44
LIME1-201ENST00000309546 IRF6O14896 467 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 UQCRFS1P1P0C7P4 283 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 MCAMP43121 646 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 PPIL2Q13356 520 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 PICALMQ13492 652 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 FAM43AQ8N2R8 423 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 CD99L2Q8TCZ2 262 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 PANK1Q8TE04 598 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 ERO1AQ96HE7 468 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 IDI2Q9BXS1 227 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 RAI14Q9P0K7 980 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 RFX7Q2KHR2 1363 aa24.02■■□□□ 1.44
LIME1-201ENST00000309546 ENTPD3O75355 529 aa24.01■■□□□ 1.43
LIME1-201ENST00000309546 CETPP11597 493 aa24.01■■□□□ 1.43
LIME1-201ENST00000309546 SNAPC2Q13487 334 aa24.01■■□□□ 1.43
LIME1-201ENST00000309546 TTC39AQ5SRH9 613 aa24.01■■□□□ 1.43
LIME1-201ENST00000309546 MAST2Q6P0Q8 1798 aa24.01■■□□□ 1.43
LIME1-201ENST00000309546 GSTO1P78417 241 aa24■■□□□ 1.43
LIME1-201ENST00000309546 FAM163AQ96GL9 167 aaPredicted RBP24■■□□□ 1.43
LIME1-201ENST00000309546 DBNDD2Q9BQY9 259 aa24■■□□□ 1.43
LIME1-201ENST00000309546 ZFYVE28Q9HCC9 887 aa24■■□□□ 1.43
LIME1-201ENST00000309546 GPR108Q9NPR9 543 aa24■■□□□ 1.43
LIME1-201ENST00000309546 ZNF112Q9UJU3 913 aa24■■□□□ 1.43
LIME1-201ENST00000309546 WDHD1O75717 1129 aaPredicted RBP23.99■■□□□ 1.43
LIME1-201ENST00000309546 SP3Q02447 781 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms