RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 DHX8Q14562 1220 aaKnown RBP16.8■□□□□ 0.28
COL6A2-201ENST00000300527 LRRC24Q50LG9 513 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 GOLGA5Q8TBA6 731 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 HINFPQ9BQA5 517 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
COL6A2-201ENST00000300527 DSCC1Q9BVC3 393 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 TNRQ92752 1358 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 SALL1Q9NSC2 1324 aa16.8■□□□□ 0.28
COL6A2-201ENST00000300527 ESCO1Q5FWF5 840 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 METTL16Q86W50 562 aaKnown RBP16.79■□□□□ 0.28
COL6A2-201ENST00000300527 FOXP4Q8IVH2 680 aaPredicted RBP16.79■□□□□ 0.28
COL6A2-201ENST00000300527 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 ACTN2P35609 894 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
COL6A2-201ENST00000300527 SLC39A14Q15043 492 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 KRT40Q6A162 431 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 PPFIBP1Q86W92 1011 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 KIF5CO60282 957 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 KCNJ6P48051 423 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 AKAP17AQ02040 695 aaKnown RBP16.79■□□□□ 0.28
COL6A2-201ENST00000300527 TRDNQ13061 729 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 SPECC1LQ69YQ0 1117 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 PI16Q6UXB8 463 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 RGS22Q8NE09 1264 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
COL6A2-201ENST00000300527 PDIA6Q15084 440 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 SRLQ86TD4 932 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 GOLGA6L1Q8N7Z2 621 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 PNKPQ96T60 521 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 CCDC175P0C221 793 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 PRR29P0C7W0 189 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 IRX3P78415 501 aaPredicted RBP16.78■□□□□ 0.28
COL6A2-201ENST00000300527 TC2NQ8N9U0 490 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 POLR2DO15514 142 aaKnown RBP16.78■□□□□ 0.28
COL6A2-201ENST00000300527 FGAP02671 866 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 METAP2P50579 478 aaKnown RBP eCLIP16.78■□□□□ 0.28
COL6A2-201ENST00000300527 GTF2A1P52655 376 aaPredicted RBP16.78■□□□□ 0.28
COL6A2-201ENST00000300527 MUM1L1Q5H9M0 696 aa16.78■□□□□ 0.28
COL6A2-201ENST00000300527 ZNF496Q96IT1 587 aaPredicted RBP16.78■□□□□ 0.28
COL6A2-201ENST00000300527 CDC5LQ99459 802 aaKnown RBP16.78■□□□□ 0.28
COL6A2-201ENST00000300527 ZNF213O14771 459 aa16.77■□□□□ 0.28
COL6A2-201ENST00000300527 KCNA6P17658 529 aa16.77■□□□□ 0.28
COL6A2-201ENST00000300527 AFMP43652 599 aa16.77■□□□□ 0.28
COL6A2-201ENST00000300527 RFX5P48382 616 aaPredicted RBP16.77■□□□□ 0.28
COL6A2-201ENST00000300527 TMEM139Q8IV31 216 aa16.77■□□□□ 0.28
COL6A2-201ENST00000300527 TTC5Q8N0Z6 440 aa16.77■□□□□ 0.28
COL6A2-201ENST00000300527 EXOC4Q96A65 974 aa16.77■□□□□ 0.28
COL6A2-201ENST00000300527 TECPR2O15040 1411 aa16.77■□□□□ 0.27
COL6A2-201ENST00000300527 PES1O00541 588 aaKnown RBP16.77■□□□□ 0.27
COL6A2-201ENST00000300527 TEX33O43247 280 aa16.77■□□□□ 0.27
COL6A2-201ENST00000300527 TTC39AQ5SRH9 613 aa16.77■□□□□ 0.27
COL6A2-201ENST00000300527 ANKRD24Q8TF21 1146 aa16.77■□□□□ 0.27
COL6A2-201ENST00000300527 PUS3Q9BZE2 481 aaKnown RBP16.77■□□□□ 0.27
COL6A2-201ENST00000300527 PHF8Q9UPP1 1060 aa16.77■□□□□ 0.27
COL6A2-201ENST00000300527 SH3TC1Q8TE82 1336 aa16.77■□□□□ 0.27
COL6A2-201ENST00000300527 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 CASP1P29466 404 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 GRIN1Q05586 938 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 ZNF790Q6PG37 636 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 RSRC2Q7L4I2 434 aaKnown RBP16.76■□□□□ 0.27
COL6A2-201ENST00000300527 SLC26A6Q9BXS9 759 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 NLRP2Q9NX02 1062 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 SERTAD1Q9UHV2 236 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 HPS5Q9UPZ3 1129 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 A0A1B0GUL7 405 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 ATP8B1O43520 1251 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 ERLIN1O75477 346 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 EIF3JO75822 258 aaKnown RBP16.76■□□□□ 0.27
COL6A2-201ENST00000300527 BMP6P22004 513 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 HDXQ7Z353 690 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 NCOA7Q8NI08 942 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 DRC1Q96MC2 740 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 C19orf44Q9H6X5 657 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 SLC20A2Q08357 652 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 AMOTQ4VCS5 1084 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 KIFC2Q96AC6 838 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 SENP2Q9HC62 589 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 INCENPQ9NQS7 918 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 RAI14Q9P0K7 980 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 JCADQ9P266 1359 aa16.76■□□□□ 0.27
COL6A2-201ENST00000300527 CCDC151A5D8V7 595 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 STX10O60499 249 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 CPLX2Q6PUV4 134 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 SRGAP1Q7Z6B7 1085 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 HOOK1Q9UJC3 728 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 ADAMTS13Q76LX8 1427 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 NRXN3Q9Y4C0 1643 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 NOM1Q5C9Z4 860 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 SMYD4Q8IYR2 804 aaPredicted RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 CMTR1Q8N1G2 835 aaKnown RBP16.75■□□□□ 0.27
COL6A2-201ENST00000300527 IGSF22Q8N9C0 903 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 MAN1B1Q9UKM7 699 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 KCNJ14Q9UNX9 436 aa16.75■□□□□ 0.27
COL6A2-201ENST00000300527 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms