RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 DCAF15Q66K64 600 aa17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 XAGE2Q96GT9 111 aa17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 PDS5AQ29RF7 1337 aaKnown RBP17.17■□□□□ 0.34
TMEM41B-201ENST00000299596 IGF2BP3O00425 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 VGLL4Q14135 290 aa17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 CDC42EP5Q6NZY7 148 aa17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 FAM151AQ8WW52 585 aa17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 NEUROD6Q96NK8 337 aa17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 R3HDMLQ9H3Y0 253 aa17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 RPAP1Q9BWH6 1393 aaPredicted RBP17.16■□□□□ 0.34
TMEM41B-201ENST00000299596 PNMA6EA0A0J9YXQ4 647 aa17.15■□□□□ 0.34
TMEM41B-201ENST00000299596 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
TMEM41B-201ENST00000299596 SPTY2D1Q68D10 685 aaPredicted RBP17.15■□□□□ 0.34
TMEM41B-201ENST00000299596 SLF2Q8IX21 1173 aa17.15■□□□□ 0.34
TMEM41B-201ENST00000299596 FTSJ3Q8IY81 847 aaKnown RBP17.15■□□□□ 0.34
TMEM41B-201ENST00000299596 USP40Q9NVE5 1235 aa17.15■□□□□ 0.34
TMEM41B-201ENST00000299596 GTF2A2P52657 109 aa17.14■□□□□ 0.33
TMEM41B-201ENST00000299596 GORABQ5T7V8 394 aa17.14■□□□□ 0.33
TMEM41B-201ENST00000299596 MS4A4AQ96JQ5 239 aa17.14■□□□□ 0.33
TMEM41B-201ENST00000299596 WRNIP1Q96S55 665 aa17.14■□□□□ 0.33
TMEM41B-201ENST00000299596 ABCF2Q9UG63 623 aa17.14■□□□□ 0.33
TMEM41B-201ENST00000299596 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
TMEM41B-201ENST00000299596 SPDYE5A6NIY4 337 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 MLLT1Q03111 559 aaPredicted RBP17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 ERO1BQ86YB8 467 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 DZIP1Q86YF9 867 aaKnown RBP17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 PTPN18Q99952 460 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 ZNF341Q9BYN7 854 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 ATP8B2P98198 1209 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 TCP10Q12799 353 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 NFIAQ12857 509 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 OTUD5Q96G74 571 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 FAM163AQ96GL9 167 aaPredicted RBP17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 SNCAIPQ9Y6H5 919 aa17.13■□□□□ 0.33
TMEM41B-201ENST00000299596 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 CRHR2Q13324 411 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 POLA2Q14181 598 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 CCL15Q16663 113 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 FBXO46Q6PJ61 603 aaPredicted RBP17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 MIGA2Q7L4E1 593 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 SSH3Q8TE77 659 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 ZKSCAN4Q969J2 545 aaPredicted RBP17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 FAM198AQ9UFP1 575 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 HPS5Q9UPZ3 1129 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 GAKO14976 1311 aa17.12■□□□□ 0.33
TMEM41B-201ENST00000299596 MYH13Q9UKX3 1938 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 ENTPD3O75355 529 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 BRI3BPQ8WY22 251 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 IDI2Q9BXS1 227 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 GPR108Q9NPR9 543 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 HMG20BQ9P0W2 317 aa17.11■□□□□ 0.33
TMEM41B-201ENST00000299596 UQCRFS1P1P0C7P4 283 aa17.1■□□□□ 0.33
TMEM41B-201ENST00000299596 CETPP11597 493 aa17.1■□□□□ 0.33
TMEM41B-201ENST00000299596 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
TMEM41B-201ENST00000299596 ERO1AQ96HE7 468 aa17.1■□□□□ 0.33
TMEM41B-201ENST00000299596 ZNF112Q9UJU3 913 aa17.1■□□□□ 0.33
TMEM41B-201ENST00000299596 SURF6O75683 361 aaKnown RBP17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 WDHD1O75717 1129 aaPredicted RBP17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 ARID4AP29374 1257 aaPredicted RBP17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 PPATQ06203 517 aa17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 PPIL2Q13356 520 aa17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
TMEM41B-201ENST00000299596 LAMB1P07942 1786 aa17.08■□□□□ 0.33
TMEM41B-201ENST00000299596 MROH7-TTC4A0A0A0MT08 1334 aa17.08■□□□□ 0.33
TMEM41B-201ENST00000299596 IRF6O14896 467 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 LDHCP07864 332 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 RLBP1P12271 317 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 INPP5BP32019 993 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 RGS3P49796 1198 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 GSTO1P78417 241 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 SP3Q02447 781 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 MECOMQ03112 1051 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 ZCCHC17Q9NP64 241 aaKnown RBP17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 OTOFQ9HC10 1997 aa17.08■□□□□ 0.32
TMEM41B-201ENST00000299596 GPR75-ASB3A0A0A6YYF3 556 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 MAP4K4O95819 1239 aaPredicted RBP17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 BTDP43251 543 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 TAF1CQ15572 869 aaPredicted RBP17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 TNNI3KQ59H18 835 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 ZFPM1Q8IX07 1006 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 FAM43AQ8N2R8 423 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 FPGT-TNNI3KV9GXZ4 949 aa17.07■□□□□ 0.32
TMEM41B-201ENST00000299596 MS4A1P11836 297 aa17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 SOX10P56693 466 aa17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 CCDC158Q5M9N0 1113 aa17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 NOL9Q5SY16 702 aaKnown RBP17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 PI16Q6UXB8 463 aa17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 OTOP1Q7RTM1 612 aa17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 ZSCAN29Q8IWY8 852 aaPredicted RBP17.06■□□□□ 0.32
TMEM41B-201ENST00000299596 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms