RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PCDHB15Q9Y5E8 787 aa25.98■■□□□ 1.75
SMCO4-201ENST00000298966 LMBR1LQ6UX01 489 aa25.97■■□□□ 1.75
SMCO4-201ENST00000298966 RPAP2Q8IXW5 612 aaPredicted RBP25.97■■□□□ 1.75
SMCO4-201ENST00000298966 TDRD7Q8NHU6 1098 aaKnown RBP25.97■■□□□ 1.75
SMCO4-201ENST00000298966 SH3TC2Q8TF17 1288 aa25.97■■□□□ 1.75
SMCO4-201ENST00000298966 ZNF594Q96JF6 807 aaPredicted RBP25.97■■□□□ 1.75
SMCO4-201ENST00000298966 TLR2O60603 784 aa25.96■■□□□ 1.75
SMCO4-201ENST00000298966 ZCCHC17Q9NP64 241 aaKnown RBP25.96■■□□□ 1.75
SMCO4-201ENST00000298966 SPDYE5A6NIY4 337 aa25.95■■□□□ 1.74
SMCO4-201ENST00000298966 CETPP11597 493 aa25.95■■□□□ 1.74
SMCO4-201ENST00000298966 HIBADHP31937 336 aaKnown RBP25.95■■□□□ 1.74
SMCO4-201ENST00000298966 CRKP46108 304 aa25.95■■□□□ 1.74
SMCO4-201ENST00000298966 ZSWIM8A7E2V4 1837 aa25.94■■□□□ 1.74
SMCO4-201ENST00000298966 GNRH1P01148 92 aa25.94■■□□□ 1.74
SMCO4-201ENST00000298966 GNAI2P04899 355 aa25.94■■□□□ 1.74
SMCO4-201ENST00000298966 PRMT2P55345 433 aa25.94■■□□□ 1.74
SMCO4-201ENST00000298966 LACTBP83111 547 aaPredicted RBP25.94■■□□□ 1.74
SMCO4-201ENST00000298966 UBE4AQ14139 1066 aa25.94■■□□□ 1.74
SMCO4-201ENST00000298966 GYG1P46976 350 aa25.93■■□□□ 1.74
SMCO4-201ENST00000298966 MEIS3Q99687 375 aa25.93■■□□□ 1.74
SMCO4-201ENST00000298966 ARHGAP39Q9C0H5 1083 aa25.93■■□□□ 1.74
SMCO4-201ENST00000298966 EPHA10Q5JZY3 1008 aa25.92■■□□□ 1.74
SMCO4-201ENST00000298966 ERO1BQ86YB8 467 aa25.92■■□□□ 1.74
SMCO4-201ENST00000298966 UBTFL1P0CB47 393 aaPredicted RBP25.91■■□□□ 1.74
SMCO4-201ENST00000298966 SNAPC2Q13487 334 aa25.91■■□□□ 1.74
SMCO4-201ENST00000298966 CHRDL2Q6WN34 429 aa25.91■■□□□ 1.74
SMCO4-201ENST00000298966 FAM84BQ96KN1 310 aaPredicted RBP25.91■■□□□ 1.74
SMCO4-201ENST00000298966 USP44Q9H0E7 712 aa25.91■■□□□ 1.74
SMCO4-201ENST00000298966 SNCAIPQ9Y6H5 919 aa25.91■■□□□ 1.74
SMCO4-201ENST00000298966 BTBD19C9JJ37 291 aa25.9■■□□□ 1.74
SMCO4-201ENST00000298966 HMMRO75330 724 aa25.9■■□□□ 1.74
SMCO4-201ENST00000298966 HOOK2Q96ED9 719 aa25.9■■□□□ 1.74
SMCO4-201ENST00000298966 WRNIP1Q96S55 665 aa25.9■■□□□ 1.74
SMCO4-201ENST00000298966 UTYO14607 1347 aa25.89■■□□□ 1.74
SMCO4-201ENST00000298966 GRM8O00222 908 aa25.89■■□□□ 1.74
SMCO4-201ENST00000298966 HDLBPQ00341 1268 aaKnown RBP25.89■■□□□ 1.74
SMCO4-201ENST00000298966 ANKRD44Q8N8A2 993 aa25.89■■□□□ 1.74
SMCO4-201ENST00000298966 DPF3Q92784 378 aa25.89■■□□□ 1.74
SMCO4-201ENST00000298966 TMOD2Q9NZR1 351 aa25.89■■□□□ 1.74
SMCO4-201ENST00000298966 IRF6O14896 467 aa25.88■■□□□ 1.73
SMCO4-201ENST00000298966 IGHDP01880 384 aa25.87■■□□□ 1.73
SMCO4-201ENST00000298966 CACNB3P54284 484 aa25.87■■□□□ 1.73
SMCO4-201ENST00000298966 PPIL2Q13356 520 aa25.87■■□□□ 1.73
SMCO4-201ENST00000298966 VPS37DQ86XT2 251 aa25.87■■□□□ 1.73
SMCO4-201ENST00000298966 TBC1D22AQ8WUA7 517 aa25.87■■□□□ 1.73
SMCO4-201ENST00000298966 ZKSCAN4Q969J2 545 aaPredicted RBP25.87■■□□□ 1.73
SMCO4-201ENST00000298966 TEKT1Q969V4 418 aa25.87■■□□□ 1.73
SMCO4-201ENST00000298966 C9orf78Q9NZ63 289 aaPredicted RBP25.87■■□□□ 1.73
SMCO4-201ENST00000298966 ECM2O94769 699 aaPredicted RBP25.86■■□□□ 1.73
SMCO4-201ENST00000298966 CHAF1AQ13111 956 aaPredicted RBP25.86■■□□□ 1.73
SMCO4-201ENST00000298966 GRIK5Q16478 980 aa25.86■■□□□ 1.73
SMCO4-201ENST00000298966 NKX2-3Q8TAU0 364 aa25.86■■□□□ 1.73
SMCO4-201ENST00000298966 FRAT2O75474 233 aaPredicted RBP25.85■■□□□ 1.73
SMCO4-201ENST00000298966 HOXD10P28358 340 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 MTFR1Q15390 333 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 DCAF15Q66K64 600 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 CEP85Q6P2H3 762 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 C17orf99Q6UX52 265 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 FAM83AQ86UY5 434 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 SMC5Q8IY18 1101 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 SHISA4Q96DD7 197 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 SRRDQ9UH36 339 aa25.85■■□□□ 1.73
SMCO4-201ENST00000298966 IQSEC3Q9UPP2 1182 aaPredicted RBP25.85■■□□□ 1.73
SMCO4-201ENST00000298966 PSMC4P43686 418 aa25.84■■□□□ 1.73
SMCO4-201ENST00000298966 PUS3Q9BZE2 481 aaKnown RBP25.84■■□□□ 1.73
SMCO4-201ENST00000298966 RBM27Q9P2N5 1060 aaKnown RBP25.84■■□□□ 1.73
SMCO4-201ENST00000298966 FKBP1CQ5VVH2 108 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 FBXO33Q7Z6M2 555 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 RAET1EQ8TD07 263 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 HTATIP2Q9BUP3 242 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 C1orf115Q9H7X2 142 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 CPA4Q9UI42 421 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 MROH5Q6ZUA9 1318 aa25.83■■□□□ 1.73
SMCO4-201ENST00000298966 FMNL1O95466 1100 aaPredicted RBP25.82■■□□□ 1.72
SMCO4-201ENST00000298966 GRK4P32298 578 aa25.82■■□□□ 1.72
SMCO4-201ENST00000298966 PPATQ06203 517 aa25.82■■□□□ 1.72
SMCO4-201ENST00000298966 CAVIN4Q5BKX8 364 aa25.82■■□□□ 1.72
SMCO4-201ENST00000298966 ZDHHC15Q96MV8 337 aa25.82■■□□□ 1.72
SMCO4-201ENST00000298966 ZNF341Q9BYN7 854 aa25.82■■□□□ 1.72
SMCO4-201ENST00000298966 OSBPP22059 807 aa25.81■■□□□ 1.72
SMCO4-201ENST00000298966 ANKRD23Q86SG2 305 aa25.81■■□□□ 1.72
SMCO4-201ENST00000298966 TRIM47Q96LD4 638 aa25.81■■□□□ 1.72
SMCO4-201ENST00000298966 MRIQ9BWK5 157 aa25.81■■□□□ 1.72
SMCO4-201ENST00000298966 RIPOR2Q9Y4F9 1068 aa25.81■■□□□ 1.72
SMCO4-201ENST00000298966 CTGFP29279 349 aa25.8■■□□□ 1.72
SMCO4-201ENST00000298966 ATP8B2P98198 1209 aa25.8■■□□□ 1.72
SMCO4-201ENST00000298966 LRRFIP2Q9Y608 721 aaKnown RBP25.8■■□□□ 1.72
SMCO4-201ENST00000298966 MAST3O60307 1309 aa25.8■■□□□ 1.72
SMCO4-201ENST00000298966 RPAP1Q9BWH6 1393 aaPredicted RBP25.8■■□□□ 1.72
SMCO4-201ENST00000298966 PDHXO00330 501 aa25.79■■□□□ 1.72
SMCO4-201ENST00000298966 GJB1P08034 283 aa25.79■■□□□ 1.72
SMCO4-201ENST00000298966 NBPF7P0C2Y1 421 aaPredicted RBP25.79■■□□□ 1.72
SMCO4-201ENST00000298966 GJA8P48165 433 aa25.79■■□□□ 1.72
SMCO4-201ENST00000298966 MTX1Q13505 466 aa25.79■■□□□ 1.72
SMCO4-201ENST00000298966 SIRT2Q8IXJ6 389 aa25.79■■□□□ 1.72
SMCO4-201ENST00000298966 BIN2Q9UBW5 565 aaPredicted RBP25.79■■□□□ 1.72
SMCO4-201ENST00000298966 MYPNQ86TC9 1320 aa25.79■■□□□ 1.72
SMCO4-201ENST00000298966 CCL5P13501 91 aa25.78■■□□□ 1.72
SMCO4-201ENST00000298966 UBXN2AP68543 259 aa25.78■■□□□ 1.72
SMCO4-201ENST00000298966 APOBEC3HQ6NTF7 200 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms