RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 ABCC5O15440 1437 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 ATP5DP30049 168 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 ZNF772Q68DY9 489 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 F8W031 263 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 ARID4AP29374 1257 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 RASA3Q14644 834 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 CCDC152Q4G0S7 254 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 PPP1R21Q6ZMI0 780 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 VTI1AQ96AJ9 217 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 MBIPQ9NS73 344 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 MTUS1Q9ULD2 1270 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 FRMD4BQ9Y2L6 1034 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 KIAA0556O60303 1618 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 SDSP20132 328 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 NEDD9Q14511 834 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 ESR2Q92731 530 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 RRP36Q96EU6 259 aaKnown RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 UBAP1LF5GYI3 381 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 CYP7A1P22680 504 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 PCK1P35558 622 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 MSANTD4Q8NCY6 345 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 PFDN4Q9NQP4 134 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 DISP3Q9P2K9 1392 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 IGSF3O75054 1194 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 GAS8O95995 478 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 LDHCP07864 332 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 ESYT1Q9BSJ8 1104 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 ITGB1BP2Q9UKP3 347 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 RBM8AQ9Y5S9 174 aaKnown RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 NSD2O96028 1365 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 TTC36A6NLP5 189 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 PLIN2Q99541 437 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 BAG1Q99933 345 aaPredicted RBP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 MAP3K7CLP57077 242 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 MCMDC2Q4G0Z9 681 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 CCDC122Q5T0U0 273 aa6.23□□□□□ -1.41
CPSF2-201ENST00000298875 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPSF2-201ENST00000298875 CALCOCO2Q13137 446 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 TMTC2Q8N394 836 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 ABCA5Q8WWZ7 1642 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 ZMYM3Q14202 1370 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 APOBRQ0VD83 1088 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 INF2Q27J81 1249 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 CHST3Q7LGC8 479 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 C19orf44Q9H6X5 657 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 C6orf50Q9HD87 102 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 KRT9P35527 623 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 PPP1R12CQ9BZL4 782 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 PAG1Q9NWQ8 432 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 PPFIA4O75335 1185 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 CCT6BQ92526 530 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 UTP11Q9Y3A2 253 aaKnown RBP6.22□□□□□ -1.41
CPSF2-201ENST00000298875 HSPA1LP34931 641 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 EVCP57679 992 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 ZKSCAN8Q15776 578 aaPredicted RBP6.22□□□□□ -1.41
CPSF2-201ENST00000298875 MAGEB6P1A0A0J9YX57 407 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 TRIM75PA6NK02 468 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 PDE1CQ14123 709 aaPredicted RBP6.22□□□□□ -1.41
CPSF2-201ENST00000298875 CCDC170Q8IYT3 715 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 RAD50Q92878 1312 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 SCAF11Q99590 1463 aaKnown RBP6.22□□□□□ -1.41
CPSF2-201ENST00000298875 MAGI3Q5TCQ9 1506 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 SBNO2Q9Y2G9 1366 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 RHPN1Q8TCX5 695 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 ARHGEF2Q92974 986 aaKnown RBP6.22□□□□□ -1.41
CPSF2-201ENST00000298875 HGSO14964 777 aaPredicted RBP6.22□□□□□ -1.41
CPSF2-201ENST00000298875 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 Q9H521 79 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 HDAC9Q9UKV0 1011 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 PPARDQ03181 441 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 ITIH3Q06033 890 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 ANKRD24Q8TF21 1146 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 CEP170Q5SW79 1584 aa6.22□□□□□ -1.41
CPSF2-201ENST00000298875 PPFIA1Q13136 1202 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 CCDC92Q53HC0 331 aaPredicted RBP6.21□□□□□ -1.41
CPSF2-201ENST00000298875 CNGA4Q8IV77 575 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 APLFQ8IW19 511 aaPredicted RBP6.21□□□□□ -1.41
CPSF2-201ENST00000298875 GFM2Q969S9 779 aaKnown RBP6.21□□□□□ -1.41
CPSF2-201ENST00000298875 GBP5Q96PP8 586 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 NAPGQ99747 312 aaPredicted RBP6.21□□□□□ -1.41
CPSF2-201ENST00000298875 SYNRGQ9UMZ2 1314 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 ZNF804AQ7Z570 1209 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 CCDC26Q8TAB7 109 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 KIFAP3Q92845 792 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 MEIS3Q99687 375 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 E7EVH7 732 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 ZNF131P52739 623 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 ZGPATQ8N5A5 531 aaKnown RBP6.21□□□□□ -1.41
CPSF2-201ENST00000298875 RPGRIP1Q96KN7 1286 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 PDE1AP54750 535 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 PDCD2Q16342 344 aaPredicted RBP6.21□□□□□ -1.41
CPSF2-201ENST00000298875 PKD2L1Q9P0L9 805 aa6.21□□□□□ -1.41
CPSF2-201ENST00000298875 ARAP3Q8WWN8 1544 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 ADAMTS2O95450 1211 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 TBC1D31Q96DN5 1066 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 IQSEC3Q9UPP2 1182 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 PI4KAP2A4QPH2 592 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 AKR1B15C9JRZ8 316 aaPredicted RBP6.21□□□□□ -1.42
CPSF2-201ENST00000298875 PI4KAP1Q8N8J0 262 aa6.21□□□□□ -1.42
CPSF2-201ENST00000298875 KIFC2Q96AC6 838 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms