RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 IL13P35225 146 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 PIK3AP1Q6ZUJ8 805 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 KRT83P78385 493 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 SERPINA10Q9UK55 444 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 PIK3C2GO75747 1445 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 DDX39AO00148 427 aaKnown RBP19.48■□□□□ 0.71
SHANK1-201ENST00000293441 KIF4AO95239 1232 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 RPS6KB1P23443 525 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 SPECC1LQ69YQ0 1117 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 CAPZA3Q96KX2 299 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 PRDM1O75626 825 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 FNBP1Q96RU3 617 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 CTNND2Q9UQB3 1225 aa19.48■□□□□ 0.71
SHANK1-201ENST00000293441 COL17A1Q9UMD9 1497 aaPredicted RBP19.48■□□□□ 0.71
SHANK1-201ENST00000293441 CTAGE9A4FU28 777 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 GPAA1O43292 621 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 CTDSPL2Q05D32 466 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 BIRC3Q13489 604 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 MAST1Q9Y2H9 1570 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 DNAJC10Q8IXB1 793 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 GPHNQ9NQX3 736 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-201ENST00000293441 SLC27A2O14975 620 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 USH1GQ495M9 461 aa19.47■□□□□ 0.71
SHANK1-201ENST00000293441 APBB1IPQ7Z5R6 666 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-201ENST00000293441 CCDC63Q8NA47 563 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 NOP56O00567 594 aaKnown RBP19.46■□□□□ 0.71
SHANK1-201ENST00000293441 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-201ENST00000293441 SUCLG2Q96I99 432 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 IVNS1ABPQ9Y6Y0 642 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 A0A1B0GVL5 298 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 KARSQ15046 597 aaKnown RBP19.46■□□□□ 0.71
SHANK1-201ENST00000293441 EPB41P11171 864 aaKnown RBP19.46■□□□□ 0.71
SHANK1-201ENST00000293441 MAEAQ7L5Y9 396 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 ATP10AO60312 1499 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 KIF21AQ7Z4S6 1674 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 KRT86O43790 486 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 DEXIO95424 95 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 RPL13P26373 211 aaKnown RBP19.46■□□□□ 0.71
SHANK1-201ENST00000293441 PPM1EQ8WY54 764 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 UIMC1Q96RL1 719 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 GUCA1BQ9UMX6 200 aa19.46■□□□□ 0.71
SHANK1-201ENST00000293441 APPBP2Q92624 585 aa19.46■□□□□ 0.7
SHANK1-201ENST00000293441 TMEM87BQ96K49 555 aa19.46■□□□□ 0.7
SHANK1-201ENST00000293441 GINS2Q9Y248 185 aa19.46■□□□□ 0.7
SHANK1-201ENST00000293441 ZBTB7BO15156 539 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-201ENST00000293441 RRP9O43818 475 aaKnown RBP19.45■□□□□ 0.7
SHANK1-201ENST00000293441 MSL1Q68DK7 614 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 USP26Q9BXU7 913 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 V9GY48 417 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-201ENST00000293441 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.45■□□□□ 0.7
SHANK1-201ENST00000293441 IFNKQ9P0W0 207 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 USP19O94966 1318 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 TRAF5O00463 557 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 GTF2F1P35269 517 aaKnown RBP eCLIP19.45■□□□□ 0.7
SHANK1-201ENST00000293441 C8orf34Q49A92 452 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 SUPT20HQ8NEM7 779 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 LPIN2Q92539 896 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 WDR44Q5JSH3 913 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 ATP6V0A2Q9Y487 856 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 NDUFB9Q9Y6M9 179 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 CPXCR1Q8N123 301 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 PODXL2Q9NZ53 605 aa19.45■□□□□ 0.7
SHANK1-201ENST00000293441 NCAPH2Q6IBW4 605 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 MAK16Q9BXY0 300 aaKnown RBP19.44■□□□□ 0.7
SHANK1-201ENST00000293441 TXKP42681 527 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 NIM1KQ8IY84 436 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 ATP2C2O75185 946 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 ABCC2Q92887 1545 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 SMTNP53814 917 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 SPATA5Q8NB90 893 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 TGFBRAP1Q8WUH2 860 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 FAM227BQ96M60 508 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 SLAIN2Q9P270 581 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 ARHGEF10O15013 1369 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 EAPPQ56P03 285 aaPredicted RBP19.44■□□□□ 0.7
SHANK1-201ENST00000293441 MAPKAPK5Q8IW41 473 aa19.44■□□□□ 0.7
SHANK1-201ENST00000293441 GTPBP4Q9BZE4 634 aaKnown RBP19.44■□□□□ 0.7
SHANK1-201ENST00000293441 ATP2A1O14983 1001 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 ELP1O95163 1332 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 PDE4DQ08499 809 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 FNBP4Q8N3X1 1017 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-201ENST00000293441 PROCA1Q8NCQ7 364 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-201ENST00000293441 LZTFL1Q9NQ48 299 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 PLCD1P51178 756 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 IFT74Q96LB3 600 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 CFAP43Q8NDM7 1665 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 NCOA5Q9HCD5 579 aaKnown RBP19.43■□□□□ 0.7
SHANK1-201ENST00000293441 ZBED4O75132 1171 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 STRN3Q13033 797 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 BRDTQ58F21 947 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-201ENST00000293441 OTUD7AQ8TE49 926 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-201ENST00000293441 CCDC114Q96M63 670 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 CCDC77Q9BR77 488 aa19.43■□□□□ 0.7
SHANK1-201ENST00000293441 TCOF1Q13428 1488 aaKnown RBP19.43■□□□□ 0.7
SHANK1-201ENST00000293441 KRT9P35527 623 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 MROH5Q6ZUA9 1318 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 SLC1A4P43007 532 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 GIMAP7Q8NHV1 300 aa19.42■□□□□ 0.7
SHANK1-201ENST00000293441 BMS1Q14692 1282 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms