RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 TRIM75PA6NK02 468 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 AKR1B10O60218 316 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 CACNA2D4Q7Z3S7 1137 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 TMEM232C9JQI7 657 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 UBA7P41226 1012 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 SPECC1LQ69YQ0 1117 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 SMYD4Q8IYR2 804 aaPredicted RBP19.43■□□□□ 0.7
SRF-201ENST00000265354 BLZF1Q9H2G9 400 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 MED14O60244 1454 aa19.43■□□□□ 0.7
SRF-201ENST00000265354 CTCFLQ8NI51 663 aaPredicted RBP19.43■□□□□ 0.7
SRF-201ENST00000265354 PUS3Q9BZE2 481 aaKnown RBP19.43■□□□□ 0.7
SRF-201ENST00000265354 ANGEL1Q9UNK9 670 aaKnown RBP19.43■□□□□ 0.7
SRF-201ENST00000265354 ARID5AQ03989 594 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 CTDSPL2Q05D32 466 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 CCDC122Q5T0U0 273 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 AMOTL1Q8IY63 956 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 ORAI2Q96SN7 254 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 HELLSQ9NRZ9 838 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 TAB2Q9NYJ8 693 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 SLC4A4Q9Y6R1 1079 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 ANKRD18BA2A2Z9 1011 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 MCM7P33993 719 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 USP5P45974 858 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 ATL3Q6DD88 541 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 LINC00301Q8NCQ3 95 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 ANKRD7Q92527 254 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 XAGE2Q96GT9 111 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 MAP3K4Q9Y6R4 1608 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 EYA2O00167 538 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 KRT18P05783 430 aaKnown RBP19.42■□□□□ 0.7
SRF-201ENST00000265354 KRT9P35527 623 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 PAFAH1B1P43034 410 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 IRX2Q9BZI1 471 aaPredicted RBP19.42■□□□□ 0.7
SRF-201ENST00000265354 PREX2Q70Z35 1606 aa19.42■□□□□ 0.7
SRF-201ENST00000265354 PLEKHG3A1L390 1219 aa19.41■□□□□ 0.7
SRF-201ENST00000265354 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.41■□□□□ 0.7
SRF-201ENST00000265354 PARD6BQ9BYG5 372 aa19.41■□□□□ 0.7
SRF-201ENST00000265354 IQCA1Q86XH1 822 aa19.41■□□□□ 0.7
SRF-201ENST00000265354 ANKLE2Q86XL3 938 aa19.41■□□□□ 0.7
SRF-201ENST00000265354 ADCY9O60503 1353 aa19.41■□□□□ 0.7
SRF-201ENST00000265354 IVLP07476 585 aa19.41■□□□□ 0.7
SRF-201ENST00000265354 COL9A3Q14050 684 aaPredicted RBP19.41■□□□□ 0.7
SRF-201ENST00000265354 POTEB2H3BUK9 544 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 ENC1O14682 589 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 POSTNQ15063 836 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 MAGEB6Q8N7X4 407 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 ATRIPQ8WXE1 791 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 ZFYP08048 801 aaPredicted RBP19.4■□□□□ 0.7
SRF-201ENST00000265354 CTNND2Q9UQB3 1225 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 EFCAB8A8MWE9 144 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 TUBB4AP04350 444 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 TTC19Q6DKK2 380 aaPredicted RBP19.4■□□□□ 0.7
SRF-201ENST00000265354 MAATS1Q7Z4T9 603 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 JAG2Q9Y219 1238 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 CCDC178Q5BJE1 867 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 KANK3Q6NY19 840 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 GPR161Q8N6U8 529 aaKnown RBP19.4■□□□□ 0.7
SRF-201ENST00000265354 RGS22Q8NE09 1264 aa19.4■□□□□ 0.7
SRF-201ENST00000265354 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.7
SRF-201ENST00000265354 ERCC6L2Q5T890 1561 aa19.39■□□□□ 0.7
SRF-201ENST00000265354 CATIPQ7Z7H3 387 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 E9PCH4 1651 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 LONRF2Q1L5Z9 754 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 NBPF11Q86T75 865 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 IFT81Q8WYA0 676 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 SAMSN1Q9NSI8 373 aaKnown RBP19.39■□□□□ 0.69
SRF-201ENST00000265354 CCDC194A0A1B0GVG4 234 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 IQCB1Q15051 598 aa19.39■□□□□ 0.69
SRF-201ENST00000265354 YEATS2Q9ULM3 1422 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 PSDA5PKW4 1024 aaPredicted RBP19.38■□□□□ 0.69
SRF-201ENST00000265354 E4F1Q66K89 784 aaPredicted RBP19.38■□□□□ 0.69
SRF-201ENST00000265354 MMRN2Q9H8L6 949 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 SEPT11Q9NVA2 429 aaKnown RBP19.38■□□□□ 0.69
SRF-201ENST00000265354 MORC2Q9Y6X9 1032 aaPredicted RBP19.38■□□□□ 0.69
SRF-201ENST00000265354 MBD4O95243 580 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 PIP4K2BP78356 416 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 IQCEQ6IPM2 695 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 ARMCX5Q6P1M9 558 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 TTLL7Q6ZT98 887 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 MYO5CQ9NQX4 1742 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 A0A0G2JLW4 131 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 CMA1P23946 247 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 MRPS25P82663 173 aaKnown RBP19.38■□□□□ 0.69
SRF-201ENST00000265354 ARMT1Q9H993 441 aa19.38■□□□□ 0.69
SRF-201ENST00000265354 LUC7L2Q9Y383 392 aaKnown RBP19.38■□□□□ 0.69
SRF-201ENST00000265354 EBAG9O00559 213 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 CASP1P29466 404 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 ADORA1P30542 326 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
SRF-201ENST00000265354 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 CROCC2H7BZ55 1655 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 CARMIL3Q8ND23 1372 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 DPF2Q92785 391 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 V9GY48 417 aaPredicted RBP19.37■□□□□ 0.69
SRF-201ENST00000265354 TNRQ92752 1358 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 SOWAHDA6NJG2 315 aa19.37■□□□□ 0.69
SRF-201ENST00000265354 USO1O60763 962 aaKnown RBP19.37■□□□□ 0.69
SRF-201ENST00000265354 ZNF274Q96GC6 653 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms