RNA–Protein interactions for RNA: ENST00000264951.8

XRN1-201, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XRN1, Length 10,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-201ENST00000264951 SNCBQ16143 134 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 TMEM67Q5HYA8 995 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ARHGAP18Q8N392 663 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 FGFR1OP2Q9NVK5 253 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 SPECC1L-ADORA2AF8WAN1 911 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ZSCAN26Q16670 478 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 CENPKQ9BS16 269 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 FRMD4BQ9Y2L6 1034 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 TTC4O95801 387 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 XRCC6P12956 609 aaKnown RBP eCLIP6.08□□□□□ -1.44
XRN1-201ENST00000264951 ZNF449Q6P9G9 518 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 MCF2L2Q86YR7 1114 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ZSWIM4Q9H7M6 989 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 XAB2Q9HCS7 855 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 RBM5P52756 815 aaKnown RBP eCLIP6.08□□□□□ -1.44
XRN1-201ENST00000264951 ASIC1P78348 528 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 CADPSQ9ULU8 1353 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 E7EVH7 732 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 FAM13AO94988 1023 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 CCT6AP40227 531 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 YWHAEP62258 255 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 PHEXP78562 749 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 SCOCQ9UIL1 159 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 TLDC2A0PJX2 215 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ARHGAP42A6NI28 874 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ARHGEF9O43307 516 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 KDM4AO75164 1064 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 CNNM4Q6P4Q7 775 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 CDC5LQ99459 802 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 CRNKL1Q9BZJ0 848 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 DBF4Q9UBU7 674 aaPredicted RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 GUCA1BQ9UMX6 200 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 UBXN1Q04323 297 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 FAM160A1Q05DH4 1040 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 NBPF10Q6P3W6 841 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 MLKLQ8NB16 471 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 IFT81Q8WYA0 676 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 TEKT1Q969V4 418 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ACTR5Q9H9F9 607 aaPredicted RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 TTC41PQ6P2S7 1318 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ERBINQ96RT1 1412 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ZBTB43O43298 467 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 SYF2O95926 243 aaKnown RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 PDE1CQ14123 709 aaPredicted RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 SLC9C1Q4G0N8 1177 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 CCDC92Q53HC0 331 aaPredicted RBP6.08□□□□□ -1.44
XRN1-201ENST00000264951 ZNF569Q5MCW4 686 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 TMEM57Q8N5G2 664 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 ABTB2Q8N961 1025 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 VTI1AQ96AJ9 217 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 MYO1AQ9UBC5 1043 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 EXOC7Q9UPT5 735 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 KIAA1107Q9UPP5 1409 aa6.08□□□□□ -1.44
XRN1-201ENST00000264951 GNAT3A8MTJ3 354 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 F13A1P00488 732 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 CNOT10Q9H9A5 744 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 IQSEC3Q9UPP2 1182 aaPredicted RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 SYNJ1O43426 1573 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 SUN1O94901 812 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 MCM10Q7L590 875 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 TRIM58Q8NG06 486 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 TTC21BQ7Z4L5 1316 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 ZFXP17010 805 aaPredicted RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 WDR44Q5JSH3 913 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 LLPHQ9BRT6 129 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 SPZ1Q9BXG8 430 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 BRD2P25440 801 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 FNBP4Q8N3X1 1017 aaPredicted RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 PSMD1Q99460 953 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 RALGAPBQ86X10 1494 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 ERICH3Q5RHP9 1530 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 RANBP6O60518 1105 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 GNA14O95837 355 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 WTAPQ15007 396 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 USP6NLQ92738 828 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 TXLNGQ9NUQ3 528 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 CHMP2AO43633 222 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 RAP1GDS1P52306 607 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 SLC12A2P55011 1212 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 GDAP1L1Q96MZ0 367 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 FAM96AQ9H5X1 160 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 CAMSAP2Q08AD1 1489 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 EPB41P11171 864 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 SRRM1Q8IYB3 904 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 IWS1Q96ST2 819 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 RGS16O15492 202 aaPredicted RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 STX2P32856 288 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 KPNA2P52292 529 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 NSMCE1Q8WV22 266 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 SECISBP2LQ93073 1101 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 KIFC2Q96AC6 838 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 MRPL40Q9NQ50 206 aaKnown RBP6.07□□□□□ -1.44
XRN1-201ENST00000264951 EFCAB5A4FU69 1503 aa6.07□□□□□ -1.44
XRN1-201ENST00000264951 BTBD11A6QL63 1104 aa6.06□□□□□ -1.44
XRN1-201ENST00000264951 SPOPO43791 374 aa6.06□□□□□ -1.44
XRN1-201ENST00000264951 CREB3O43889 395 aa6.06□□□□□ -1.44
XRN1-201ENST00000264951 OPHN1O60890 802 aa6.06□□□□□ -1.44
XRN1-201ENST00000264951 SMTNP53814 917 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms