RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ZNF609O15014 1411 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 CCP110O43303 1012 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 CYP7A1P22680 504 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 FUCA2Q9BTY2 467 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 IGHMBP2P38935 993 aaKnown RBP18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 CCT6AP40227 531 aaKnown RBP18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 SF3B2Q13435 895 aaKnown RBP18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 GREM2Q9H772 168 aa18.56■□□□□ 0.56
PDZRN3-201ENST00000263666 PHACTR2O75167 634 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 PDIA6Q15084 440 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 CCDC191Q8NCU4 936 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 EPC1Q9H2F5 836 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 PHKA1P46020 1223 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 SPTLC3Q9NUV7 552 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 ASAP1Q9ULH1 1129 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 NFE2L3Q9Y4A8 694 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 SLC5A1P13866 664 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 TRIM34Q9BYJ4 488 aa18.55■□□□□ 0.56
PDZRN3-201ENST00000263666 SPATA31A3Q5VYP0 1347 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 BRAPQ7Z569 592 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 LINC00301Q8NCQ3 95 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 CCDC66A2RUB6 948 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 GPS2Q13227 327 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 PPP1R1BQ9UD71 204 aaPredicted RBP18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 DLG5Q8TDM6 1919 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 HSP90B2PQ58FF3 399 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 EVCP57679 992 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 NLRP12P59046 1061 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 ZNF174Q15697 407 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 ZNF274Q96GC6 653 aaPredicted RBP18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 MRFAP1L1Q96HT8 127 aa18.54■□□□□ 0.56
PDZRN3-201ENST00000263666 NBPF26B4DH59 902 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 NBPF14Q5TI25 921 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 NBPF10Q6P3W6 841 aaKnown RBP18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 NBPF15Q8N660 670 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 DACH1Q9UI36 760 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 ERCC3P19447 782 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 ERO1AQ96HE7 468 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 UBE2Q2LH0YL09 131 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 ST7Q9NRC1 585 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 PCDHA5Q9Y5H7 936 aa18.53■□□□□ 0.56
PDZRN3-201ENST00000263666 BMS1Q14692 1282 aaKnown RBP18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 ENOX2Q16206 610 aaKnown RBP18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 N4BP3O15049 544 aa18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 NLRP5P59047 1200 aa18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 WASF1Q92558 559 aa18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 SERTAD1Q9UHV2 236 aa18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 WWC3Q9ULE0 1092 aa18.52■□□□□ 0.56
PDZRN3-201ENST00000263666 PRKAB2O43741 272 aa18.52■□□□□ 0.55
PDZRN3-201ENST00000263666 RHOXF2BP0C7M4 288 aa18.52■□□□□ 0.55
PDZRN3-201ENST00000263666 RHOXF2Q9BQY4 288 aa18.52■□□□□ 0.55
PDZRN3-201ENST00000263666 CASP1P29466 404 aa18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 KRI1Q8N9T8 703 aaKnown RBP18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 VPS54Q9P1Q0 977 aa18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 DZIP3Q86Y13 1208 aaKnown RBP18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 SMYD4Q8IYR2 804 aaPredicted RBP18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 SDR42E1Q8WUS8 393 aa18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 BAG1Q99933 345 aaPredicted RBP18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 VWA3AA6NCI4 1184 aa18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 SEC31AO94979 1220 aaKnown RBP18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 NR5A1Q13285 461 aa18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 HINFPQ9BQA5 517 aa18.51■□□□□ 0.55
PDZRN3-201ENST00000263666 KIF28PB7ZC32 967 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 FBXO38Q6PIJ6 1188 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 VAT1LQ9HCJ6 419 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 TMEM232C9JQI7 657 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 KIF5CO60282 957 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 TTF1Q15361 905 aaPredicted RBP18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 AK7Q96M32 723 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 FEZ1Q99689 392 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 CEMIPQ8WUJ3 1361 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 FOXN1O15353 648 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 LMAN1P49257 510 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 ATP2B2Q01814 1243 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 PPP1R13BQ96KQ4 1090 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 USP42Q9H9J4 1324 aaKnown RBP18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 EIF5P55010 431 aaKnown RBP18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 TCIRG1Q13488 830 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 IQCB1Q15051 598 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 RRAGBQ5VZM2 374 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 VPS16Q9H269 839 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 RTEL1Q9NZ71 1219 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 REREQ9P2R6 1566 aa18.5■□□□□ 0.55
PDZRN3-201ENST00000263666 KIF23Q02241 960 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 SENP2Q9HC62 589 aa18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 USP21Q9UK80 565 aa18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 V9GY48 417 aaPredicted RBP18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 YEATS4O95619 227 aa18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 SSBP05455 408 aaKnown RBP eCLIP18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 PDE6AP16499 860 aa18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 GTPBP4Q9BZE4 634 aaKnown RBP18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 BLZF1Q9H2G9 400 aa18.49■□□□□ 0.55
PDZRN3-201ENST00000263666 MCM7P33993 719 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 ATG9AQ7Z3C6 839 aa18.48■□□□□ 0.55
PDZRN3-201ENST00000263666 SMARCC1Q92922 1105 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms