RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 CYP2C19P33261 490 aa21.9■■□□□ 1.1
SNX4-201ENST00000251775 KCNJ6P48051 423 aa21.9■■□□□ 1.1
SNX4-201ENST00000251775 TBC1D2BQ9UPU7 963 aa21.9■■□□□ 1.1
SNX4-201ENST00000251775 COL14A1Q05707 1796 aaKnown RBP21.9■■□□□ 1.1
SNX4-201ENST00000251775 ANTXR2P58335 489 aa21.9■■□□□ 1.1
SNX4-201ENST00000251775 TMC6Q7Z403 805 aa21.9■■□□□ 1.1
SNX4-201ENST00000251775 DNAJC5Q9H3Z4 198 aa21.9■■□□□ 1.1
SNX4-201ENST00000251775 PNMA6AP0CW24 399 aaPredicted RBP21.89■■□□□ 1.1
SNX4-201ENST00000251775 DPCR1Q3MIW9 517 aa21.89■■□□□ 1.1
SNX4-201ENST00000251775 IFNKQ9P0W0 207 aa21.89■■□□□ 1.1
SNX4-201ENST00000251775 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.09
SNX4-201ENST00000251775 ADD2P35612 726 aa21.89■■□□□ 1.09
SNX4-201ENST00000251775 PLA2G4AP47712 749 aa21.89■■□□□ 1.09
SNX4-201ENST00000251775 ARHGAP29Q52LW3 1261 aa21.89■■□□□ 1.09
SNX4-201ENST00000251775 UBN2Q6ZU65 1347 aa21.89■■□□□ 1.09
SNX4-201ENST00000251775 ZNF512BQ96KM6 892 aaPredicted RBP21.89■■□□□ 1.09
SNX4-201ENST00000251775 PIH1D3Q9NQM4 214 aaKnown RBP21.89■■□□□ 1.09
SNX4-201ENST00000251775 PCDHA7Q9UN72 937 aa21.89■■□□□ 1.09
SNX4-201ENST00000251775 PDE8AO60658 829 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 PDE8BO95263 885 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 SMC2O95347 1197 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 SFPQP23246 707 aaKnown RBP eCLIP21.88■■□□□ 1.09
SNX4-201ENST00000251775 DZIP3Q86Y13 1208 aaKnown RBP21.88■■□□□ 1.09
SNX4-201ENST00000251775 MRPS27Q92552 414 aaKnown RBP21.88■■□□□ 1.09
SNX4-201ENST00000251775 ZNF213O14771 459 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 NCOA7Q8NI08 942 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 BPIFA3Q9BQP9 254 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 SDF4Q9BRK5 362 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.88■■□□□ 1.096e-6■■■□□ 19.2
SNX4-201ENST00000251775 HPS5Q9UPZ3 1129 aa21.88■■□□□ 1.09
SNX4-201ENST00000251775 KLF18A0A0U1RQI7 1052 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 EXOC5O00471 708 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 SLC9C2Q5TAH2 1124 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 NBPF3Q9H094 633 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 SLIT2O94813 1529 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 A0A1B0GVL5 298 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 ZRANB2O95218 330 aaKnown RBP eCLIP21.87■■□□□ 1.09
SNX4-201ENST00000251775 PHKA1P46020 1223 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 RAB11FIP4Q86YS3 637 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 KIAA1468Q9P260 1216 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 PLCH1Q4KWH8 1693 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 NEDD4P46934 1319 aa21.87■■□□□ 1.09
SNX4-201ENST00000251775 ERVV-1B6SEH8 477 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 OTUD7BQ6GQQ9 843 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 CHMP4CQ96CF2 233 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 DENND2AQ9ULE3 1009 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 TULP2O00295 520 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 TUBB4AP04350 444 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 IL6STP40189 918 aaPredicted RBP21.86■■□□□ 1.09
SNX4-201ENST00000251775 NDUFA8P51970 172 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 CCDC102BQ68D86 513 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 ADALQ6DHV7 355 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 ZNF34Q8IZ26 560 aa21.86■■□□□ 1.09
SNX4-201ENST00000251775 RALYLQ86SE5 291 aaKnown RBP21.85■■□□□ 1.09
SNX4-201ENST00000251775 NKX2-3Q8TAU0 364 aa21.85■■□□□ 1.09
SNX4-201ENST00000251775 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.85■■□□□ 1.09
SNX4-201ENST00000251775 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
SNX4-201ENST00000251775 GOLGA8BA8MQT2 603 aa21.85■■□□□ 1.09
SNX4-201ENST00000251775 IDH1O75874 414 aaKnown RBP21.85■■□□□ 1.09
SNX4-201ENST00000251775 HELBQ8NG08 1087 aaPredicted RBP21.85■■□□□ 1.09
SNX4-201ENST00000251775 ATRNO75882 1429 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 ETF1P62495 437 aaKnown RBP21.84■■□□□ 1.09
SNX4-201ENST00000251775 TTF1Q15361 905 aaPredicted RBP21.84■■□□□ 1.09
SNX4-201ENST00000251775 ORC3Q9UBD5 711 aaPredicted RBP21.84■■□□□ 1.09
SNX4-201ENST00000251775 WNK3Q9BYP7 1800 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 COL16A1Q07092 1604 aaPredicted RBP21.84■■□□□ 1.09
SNX4-201ENST00000251775 A0A1W2PQ27 194 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 A0A1W2PQ64 194 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 A0A1W2PQD8 194 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 NCAPHQ15003 741 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 RTEL1Q9NZ71 1219 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 C4AP0C0L4 1744 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 C4BP0C0L5 1744 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 PHLPP2Q6ZVD8 1323 aa21.84■■□□□ 1.09
SNX4-201ENST00000251775 ARID4AP29374 1257 aaPredicted RBP21.83■■□□□ 1.09
SNX4-201ENST00000251775 TBC1D10CQ8IV04 446 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 ZNF532Q9HCE3 1301 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 LRP5O75197 1615 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 CAPN2P17655 700 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 HNRNPH2P55795 449 aaKnown RBP21.83■■□□□ 1.09
SNX4-201ENST00000251775 UBE3CQ15386 1083 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 HOMER1Q86YM7 354 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 DNAI1Q9UI46 699 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.09
SNX4-201ENST00000251775 FGFR2P21802 821 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 GJB4Q9NTQ9 266 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 WDR19Q8NEZ3 1342 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 FANCGO15287 622 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 PDE6AP16499 860 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 CDK11BP21127 795 aaKnown RBP21.82■■□□□ 1.08
SNX4-201ENST00000251775 DHX8Q14562 1220 aaKnown RBP21.82■■□□□ 1.08
SNX4-201ENST00000251775 TRIM65Q6PJ69 517 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 TMCO3Q6UWJ1 677 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 UBXN4Q92575 508 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 C8orf76Q96K31 380 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 ARAP2Q8WZ64 1704 aa21.82■■□□□ 1.08
SNX4-201ENST00000251775 NRDCO43847 1150 aa21.81■■□□□ 1.08
SNX4-201ENST00000251775 DHX16O60231 1041 aaKnown RBP21.81■■□□□ 1.08
SNX4-201ENST00000251775 ZRSR1Q15695 479 aaKnown RBP21.81■■□□□ 1.08
SNX4-201ENST00000251775 LINC00301Q8NCQ3 95 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms