RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 CHRNDQ07001 517 aa29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 PUM3Q15397 648 aaKnown RBP29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 PLA2G4DQ86XP0 818 aa29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 XAGE2Q96GT9 111 aa29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 KLRG2A4D1S0 409 aaPredicted RBP29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 DHX16O60231 1041 aaKnown RBP29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 APOBRQ0VD83 1088 aa29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 CKAP2LQ8IYA6 745 aa29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 RPGRQ92834 1020 aaKnown RBP29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 BRIP1Q9BX63 1249 aa29.08■■■□□ 2.25
RUNDC3A-201ENST00000225441 SOCS7O14512 581 aa29.07■■■□□ 2.24
RUNDC3A-201ENST00000225441 FGFR2P21802 821 aa29.07■■■□□ 2.24
RUNDC3A-201ENST00000225441 ADORA1P30542 326 aa29.07■■■□□ 2.24
RUNDC3A-201ENST00000225441 ZNF165P49910 485 aa29.07■■■□□ 2.24
RUNDC3A-201ENST00000225441 CHGBP05060 677 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 GRAPQ13588 217 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 IMMTQ16891 758 aaKnown RBP29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 TTC39AQ5SRH9 613 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 SARM1Q6SZW1 724 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 LUZP1Q86V48 1076 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 GRAPLQ8TC17 118 aaPredicted RBP29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 LPIN2Q92539 896 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 UPF1Q92900 1129 aaKnown RBP eCLIP29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 ANKRD31Q8N7Z5 1873 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 ZNF75DP51815 510 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 CCDC73Q6ZRK6 1079 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 PDGFDQ9GZP0 370 aaPredicted RBP29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 KCNF1Q9H3M0 494 aa29.06■■■□□ 2.24
RUNDC3A-201ENST00000225441 GORABQ5T7V8 394 aa29.05■■■□□ 2.24
RUNDC3A-201ENST00000225441 ZNF512BQ96KM6 892 aaPredicted RBP29.05■■■□□ 2.24
RUNDC3A-201ENST00000225441 LRRC2Q9BYS8 371 aa29.05■■■□□ 2.24
RUNDC3A-201ENST00000225441 MINPP1Q9UNW1 487 aa29.05■■■□□ 2.24
RUNDC3A-201ENST00000225441 A0A1B0GUL6 1792 aa29.05■■■□□ 2.24
RUNDC3A-201ENST00000225441 STX1AQ16623 288 aa29.04■■■□□ 2.24
RUNDC3A-201ENST00000225441 APPBP2Q92624 585 aa29.04■■■□□ 2.24
RUNDC3A-201ENST00000225441 RBM17Q96I25 401 aaKnown RBP29.04■■■□□ 2.24
RUNDC3A-201ENST00000225441 ARAP2Q8WZ64 1704 aa29.04■■■□□ 2.24
RUNDC3A-201ENST00000225441 M0R2C6 588 aa29.04■■■□□ 2.24
RUNDC3A-201ENST00000225441 CCAR1Q8IX12 1150 aaKnown RBP29.04■■■□□ 2.24
RUNDC3A-201ENST00000225441 HOXA10P31260 410 aaPredicted RBP29.03■■■□□ 2.24
RUNDC3A-201ENST00000225441 FAM160A1Q05DH4 1040 aa29.03■■■□□ 2.24
RUNDC3A-201ENST00000225441 CHAF1AQ13111 956 aaPredicted RBP29.03■■■□□ 2.24
RUNDC3A-201ENST00000225441 ZSCAN25Q6NSZ9 544 aa29.03■■■□□ 2.24
RUNDC3A-201ENST00000225441 SLC16A10Q8TF71 515 aa29.03■■■□□ 2.24
RUNDC3A-201ENST00000225441 A0A1W2PQ27 194 aa29.02■■■□□ 2.24
RUNDC3A-201ENST00000225441 A0A1W2PQ64 194 aa29.02■■■□□ 2.24
RUNDC3A-201ENST00000225441 A0A1W2PQD8 194 aa29.02■■■□□ 2.24
RUNDC3A-201ENST00000225441 SLC5A1P13866 664 aa29.02■■■□□ 2.24
RUNDC3A-201ENST00000225441 OSBP2Q969R2 916 aa29.02■■■□□ 2.24
RUNDC3A-201ENST00000225441 RTEL1Q9NZ71 1219 aa29.02■■■□□ 2.24
RUNDC3A-201ENST00000225441 ENGASEQ8NFI3 743 aa29.01■■■□□ 2.23
RUNDC3A-201ENST00000225441 TRIM5Q9C035 493 aa29.01■■■□□ 2.23
RUNDC3A-201ENST00000225441 SNAP23O00161 211 aa29■■■□□ 2.23
RUNDC3A-201ENST00000225441 NEMFO60524 1076 aa29■■■□□ 2.23
RUNDC3A-201ENST00000225441 KINO60870 393 aaKnown RBP29■■■□□ 2.23
RUNDC3A-201ENST00000225441 PRKCSHP14314 528 aaPredicted RBP29■■■□□ 2.23
RUNDC3A-201ENST00000225441 DDX24Q9GZR7 859 aaKnown RBP eCLIP29■■■□□ 2.23
RUNDC3A-201ENST00000225441 FAM13BQ9NYF5 915 aa29■■■□□ 2.23
RUNDC3A-201ENST00000225441 GOLGA6L19H0YKK7 550 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 PDE6BP35913 854 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 SPC24Q8NBT2 197 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 MRFAP1L1Q96HT8 127 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 USP28Q96RU2 1077 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 CRAMP1Q96RY5 1269 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 ANKRD2Q9GZV1 360 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 ANO10Q9NW15 660 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 FKBP4Q02790 459 aaKnown RBP eCLIP28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 IQCB1Q15051 598 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 BRAPQ7Z569 592 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 PYCARDQ9ULZ3 195 aa28.99■■■□□ 2.23
RUNDC3A-201ENST00000225441 CCT2P78371 535 aaKnown RBP28.98■■■□□ 2.23
RUNDC3A-201ENST00000225441 SNW1Q13573 536 aaKnown RBP28.98■■■□□ 2.23
RUNDC3A-201ENST00000225441 UBE4AQ14139 1066 aa28.98■■■□□ 2.23
RUNDC3A-201ENST00000225441 MPNDQ8N594 471 aa28.98■■■□□ 2.23
RUNDC3A-201ENST00000225441 NCOA7Q8NI08 942 aa28.98■■■□□ 2.23
RUNDC3A-201ENST00000225441 DNAJC25Q9H1X3 360 aa28.98■■■□□ 2.23
RUNDC3A-201ENST00000225441 YEATS4O95619 227 aa28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 TTF1Q15361 905 aaPredicted RBP28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 ADALQ6DHV7 355 aa28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 MB21D2Q8IYB1 491 aaPredicted RBP28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 SRGNP10124 158 aa28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 KCNG4Q8TDN1 519 aa28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 NAT10Q9H0A0 1025 aaKnown RBP28.97■■■□□ 2.23
RUNDC3A-201ENST00000225441 PTGS1P23219 599 aa28.96■■■□□ 2.23
RUNDC3A-201ENST00000225441 RBM10P98175 930 aaKnown RBP28.96■■■□□ 2.23
RUNDC3A-201ENST00000225441 WASHC4Q2M389 1173 aa28.96■■■□□ 2.23
RUNDC3A-201ENST00000225441 DRC7Q8IY82 874 aa28.96■■■□□ 2.23
RUNDC3A-201ENST00000225441 MYH7P12883 1935 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 BBOX1O75936 387 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 FGAP02671 866 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 FDPSP14324 419 aaKnown RBP28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 NPR1P16066 1061 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 CCDC102BQ68D86 513 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 CCDC186Q7Z3E2 898 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 MRPS27Q92552 414 aaKnown RBP28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 POLR3EQ9NVU0 708 aa28.95■■■□□ 2.23
RUNDC3A-201ENST00000225441 COL11A2P13942 1736 aaPredicted RBP28.95■■■□□ 2.22
RUNDC3A-201ENST00000225441 PHKA1P46020 1223 aa28.94■■■□□ 2.22
RUNDC3A-201ENST00000225441 SLFNL1Q499Z3 407 aa28.94■■■□□ 2.22
RUNDC3A-201ENST00000225441 NCOA5Q9HCD5 579 aaKnown RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms