RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Lrrc36Q3V0M2 755 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Golga1Q9CW79 758 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 IqcdQ9D3V1 458 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Rps6ka2Q9WUT3 733 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 F2rP30558 430 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Pa2g4P50580 394 aaKnown RBP13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Dclk3Q8BWQ5 790 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 9230110C19RikQ8CC70 267 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 KaznQ69ZS8 779 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Hexim1Q8R409 356 aaKnown RBP13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Slx4ipQ9D7Y9 413 aa13.97□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Atp8b2P98199 1209 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Ppp2r5cQ60996 524 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 ThemisQ8BGW0 636 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Cd2bp2Q9CWK3 342 aaKnown RBP13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Rrbp1Q99PL5 1605 aaKnown RBP13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Ifit2Q64112 472 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Cnnm4Q69ZF7 771 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Ccdc7Q9D541 371 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Ncoa1P70365 1447 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Znf692Q3U381 531 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Pbrm1Q8BSQ9 1634 aaKnown RBP13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 TnksQ6PFX9 1320 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Ier5O89113 308 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Gtf3c5Q8R2T8 520 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Klhl20Q8VCK5 604 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Nxf1Q99JX7 618 aaKnown RBP13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 CenppQ9CZ92 286 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Tnip1Q9WUU8 647 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Lrp2bpQ9D4C6 346 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Cst12Q9DAN8 128 aa13.96□□□□□ -0.17
Col6a3-208ENSMUST00000188587 Ccdc85cE9Q6B2 420 aa13.96□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Kif1bpQ6ZPU9 617 aa13.96□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Pja2Q80U04 707 aa13.96□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Adcy3Q8VHH7 1145 aa13.96□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Ak2Q9WTP6 239 aa13.96□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Hace1Q3U0D9 909 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 MaeaQ4VC33 396 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Krt9Q6RHW0 743 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Thap12Q9CUX1 758 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Kat6bQ8BRB7 1872 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Trim27Q62158 513 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Pdzd4Q9QY39 772 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Serpinb6bO08804 377 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Asic2Q925H0 512 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Tpcn1Q9EQJ0 817 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Ftl1P29391 183 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Sap30bpQ02614 308 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Tab2Q99K90 693 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Mrps25Q9D125 171 aaKnown RBP13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Rufy3Q9D394 469 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Tmod4Q9JLH8 345 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 ChkbO55229 394 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Senp1P59110 640 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Zbtb16Q3UQ17 673 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Stxbp3Q60770 592 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Ccdc14Q8K2J4 934 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Taf4E9QAP7 1042 aaKnown RBP13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Tnni3P48787 211 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Pde1bQ01065 535 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Ice2Q3UZ18 988 aaKnown RBP13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Atp6v1aP50516 617 aaKnown RBP13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Fam83gQ5SWY7 812 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Cdcp1Q5U462 833 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 HelbQ6NVF4 1074 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 PaoxQ8C0L6 504 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Enox2Q8R0Z2 598 aa13.95□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Gm5935Q497S0 212 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Itga6Q61739 1091 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 SdsQ8VBT2 327 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Nedd9O35177 833 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Spata16Q8C636 571 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Akap8Q9DBR0 687 aaKnown RBP13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Myh10Q61879 1976 aaKnown RBP13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Mdm2P23804 489 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Fam114a2Q8VE88 497 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Polr2dQ9D7M8 142 aaKnown RBP13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Arhgap10Q6Y5D8 786 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Nek11Q8C0Q4 628 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 SncbQ91ZZ3 133 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Tubb5P99024 444 aaKnown RBP13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Atp2a3Q64518 1038 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Pih1h3bQ8C6P5 218 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Ncaph2Q8BSP2 607 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Kdm8Q9CXT6 414 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Dnajc10Q9DC23 793 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Gli2Q0VGT2 1544 aa13.94□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Cep152A2AUM9 1736 aaKnown RBP13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Krt19P19001 403 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 VimP20152 466 aaKnown RBP13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Tmtc2Q56A06 836 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Taok1Q5F2E8 1001 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Map3k12Q60700 888 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Prpf40bQ80W14 870 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Rsad2Q8CBB9 362 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Apbb1ipQ8R5A3 670 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 HhatQ8BMT9 499 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Arfgap2Q99K28 520 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Rab3gap1Q80UJ7 981 aa13.93□□□□□ -0.18
Col6a3-208ENSMUST00000188587 Cracr2bQ80ZJ8 394 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms