RNA–Protein interactions for RNA: ENSMUST00000111047.8

Bdnf-207, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,042 nt, Biotype protein coding, Subcellular localisation Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-207ENSMUST00000111047 Pik3ap1Q9EQ32 811 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Kcnh3Q9WVJ0 1095 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ccne2Q9Z238 404 aa8.61□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Adamtsl3G3UXC7 1706 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pde8bE9Q4S1 865 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Plcb3P51432 1234 aaKnown RBP8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Uri1Q3TLD5 531 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ttc12Q8BW49 704 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Golph3lQ8R088 285 aaKnown RBP8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Vps18Q8R307 973 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Gtf3c6Q9D8P7 227 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Hdac6Q9Z2V5 1149 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Sik3Q6P4S6 1311 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Gcom1E9PZ54 550 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 MyzapQ3UIJ9 466 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dusp9Q7TNL7 452 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dcaf5Q80T85 946 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cfap45Q9D9U9 551 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Elf2Q9JHC9 593 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dnai2A2AC93 623 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cdk4P30285 303 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Gnat2P50149 354 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Anp32eP97822 260 aaKnown RBP8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tbc1d5Q80XQ2 815 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ints4Q8CIM8 964 aa8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Nol7Q9D7Z3 254 aaKnown RBP8.6□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Izumo3A6PWV3 263 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Myo1bP46735 1107 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tmem109Q3UBX0 243 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Znhit6Q3UFB2 460 aaKnown RBP8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tsen34Q8BMZ5 316 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Brd3Q8K2F0 726 aaKnown RBP8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Rbm43Q99J64 343 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tet3Q8BG87 1668 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pard3Q99NH2 1333 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Epb41l2O70318 988 aaKnown RBP8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Ica1lQ3TY65 431 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 L1td1Q587J6 782 aaKnown RBP8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Acap3Q6NXL5 833 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 RbsnQ80Y56 783 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Olfm5Q8BU90 496 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 ParvgQ9ERD8 331 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Pde4bB1AWC9 736 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Bin2D3Z6Q9 489 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Rad23bP54728 416 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Kmt5bQ3U8K7 883 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Frat2Q8K025 231 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Kri1Q8VDQ9 704 aaKnown RBP8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tubb4aQ9D6F9 444 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Tulp1Q9Z273 543 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Dlg5E9Q9R9 1921 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Cdhr2E9Q7P9 1308 aa8.59□□□□□ -1.03
Bdnf-207ENSMUST00000111047 Foxp1P58462 705 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Esco1Q69Z69 843 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Dhx40Q6PE54 779 aaKnown RBP8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Abtb2Q7TQI7 1024 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Map10Q8BJS7 891 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Maats1Q8BRC6 783 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Sec62Q8BU14 398 aaKnown RBP8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Kcnj14Q8JZN3 434 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Klc3Q91W40 508 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Setdb1O88974 1307 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Med23Q80YQ2 1367 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ccdc191J3QQ27 883 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 XpcP51612 930 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Gng11P61953 73 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 SfswapQ3USH5 945 aaKnown RBP8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Inpp5bQ8K337 993 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Kcnq3Q8K3F6 873 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Zbtb1Q91VL9 713 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Pet2A2AHY8 747 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Dctn1O08788 1281 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Pde6aP27664 859 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ppp1r21Q3TDD9 780 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ccdc174Q3U155 467 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Pex1Q5BL07 1284 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Tpm4Q6IRU2 248 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Tlcd1Q99JT6 247 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Polr2dQ9D7M8 142 aaKnown RBP8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Tns2Q8CGB6 1400 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Sipa1l2Q80TE4 1722 aa8.58□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Bicdl1A0JNT9 577 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Dnajc25A2ALW5 357 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Cyp19a1P28649 503 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 SsbP32067 415 aaKnown RBP8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Zc3h12cQ5DTV4 884 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Sptlc3Q8BG54 563 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Znf771Q8BJ90 317 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Fam177a1Q8BR63 207 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Brms1Q99N20 246 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ipo7Q9EPL8 1038 aaKnown RBP8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Gm5624F6ZZG8 207 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Sept1P42209 366 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Phldb2Q8K1N2 1249 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ttc14Q9CSP9 761 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Wdr19Q3UGF1 1341 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Gm4340L7N2C4 268 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Cyp2d34L7N463 504 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Traf3ip1Q149C2 625 aa8.57□□□□□ -1.04
Bdnf-207ENSMUST00000111047 Ankrd40Q5SUE8 363 aa8.57□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms