RNA–Protein interactions for RNA: ENSMUST00000092971.12

Chd3-201, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Chd3, Length 6,066 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-201ENSMUST00000092971 Il4rP16382 810 aa16.87■□□□□ 0.29
Chd3-201ENSMUST00000092971 Cep63Q3UPP8 700 aa16.87■□□□□ 0.29
Chd3-201ENSMUST00000092971 Irs4Q9Z0Y7 1216 aa16.87■□□□□ 0.29
Chd3-201ENSMUST00000092971 CpvlQ9D3S9 478 aa16.87■□□□□ 0.29
Chd3-201ENSMUST00000092971 Slc52a2Q9D8F3 450 aa16.87■□□□□ 0.29
Chd3-201ENSMUST00000092971 LratQ9JI60 231 aa16.87■□□□□ 0.29
Chd3-201ENSMUST00000092971 Gm7298A0A0N4SVU1 1476 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 MybP06876 636 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Sap30bpQ02614 308 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Actr5Q80US4 605 aaKnown RBP16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Cep57Q8CEE0 500 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 SdsQ8VBT2 327 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Polr2dQ9D7M8 142 aaKnown RBP16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Arpp21Q9DCB4 807 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Parp2O88554 559 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Gimap5Q8BWF2 308 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Grpel1Q99LP6 217 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Lrp2bpQ9D4C6 346 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Bnip3lQ9Z2F7 218 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ccdc13D3YV10 709 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Gm5624F6ZZG8 207 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Zfp251Q6PCX8 632 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Rufy3Q9D394 469 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Casp2P29594 452 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Pank2Q3U4S0 443 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ccdc160Q3UYG1 323 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Trak2Q6P9N8 913 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Dph5Q9CWQ0 281 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Dydc2Q9D3X8 139 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Rsph3bQ9DA80 389 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ift81O35594 676 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Calcoco1Q8CGU1 691 aa16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Mrpl12Q9DB15 201 aaKnown RBP16.86■□□□□ 0.29
Chd3-201ENSMUST00000092971 Exoc3l2D3YUP5 789 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Usp35M0QWN7 1009 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Prkg1P0C605 671 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Trpc3Q9QZC1 836 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Cyp2ab1S4R196 498 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 SsbP32067 415 aaKnown RBP16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Mrps27Q8BK72 415 aaKnown RBP16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 HscbQ8K3A0 234 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 GckrQ91X44 587 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ccdc97Q9DBT3 340 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Camsap2Q8C1B1 1461 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Cpb1B2RS76 415 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Dnajc21E9Q8D0 531 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Rpl13P47963 211 aaKnown RBP16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Sh3bp1P55194 680 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Kifap3P70188 793 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Rcn2Q8BP92 320 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Nxf1Q99JX7 618 aaKnown RBP16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 CltaO08585 235 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Parp1P11103 1013 aaKnown RBP16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ccnt1Q9QWV9 724 aaKnown RBP16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ttc21bQ0HA38 1315 aa16.85■□□□□ 0.29
Chd3-201ENSMUST00000092971 MthfslL7N466 203 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Mpp4Q6P7F1 635 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Urb2E9Q7L1 1524 aaKnown RBP16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Gna11P21278 359 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Traf3ip3Q8C0G2 513 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 EsrrbQ61539 433 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 RestQ8VIG1 1082 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Ophn1Q99J31 802 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Trip13Q3UA06 432 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Serpinb13Q8CDC0 389 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Prr16A3KMN5 304 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Atp8b2P98199 1209 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 TrhQ62361 256 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Acot11Q8VHQ9 594 aa16.84■□□□□ 0.29
Chd3-201ENSMUST00000092971 Gm28043E0CXC2 719 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 ZfaP23607 742 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 NxnP97346 435 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Oxr1Q4KMM3 866 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Large2Q5XPT3 690 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Prpf40bQ80W14 870 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 AU019823E9PUQ3 292 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Pde6aP27664 859 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Rexo1Q7TT28 1213 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Eif2aQ8BJW6 581 aaKnown RBP16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Rmi1Q9D4G9 616 aa16.83■□□□□ 0.29
Chd3-201ENSMUST00000092971 Nup62clA2AG10 272 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Anks6Q6GQX6 883 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Gbp9Q8BTS3 619 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Cfap36Q8C6E0 343 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Taf4bG5E8Z2 855 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ncf2O70145 525 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Eef1bO70251 225 aaKnown RBP16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Kif5aP33175 1027 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Rrp1P56183 494 aaKnown RBP16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Scaf1Q5U4C3 1256 aaKnown RBP16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Pja2Q80U04 707 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Yars2Q8BYL4 472 aaKnown RBP16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ppp2r5dQ91V89 594 aa16.83■□□□□ 0.28
Chd3-201ENSMUST00000092971 Jdp2P97875 163 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Ccdc174Q3U155 467 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Pih1h3bQ8C6P5 218 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Vps37bQ8R0J7 285 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Fchsd1Q6PFY1 688 aa16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Wbp11Q923D5 641 aaKnown RBP16.82■□□□□ 0.28
Chd3-201ENSMUST00000092971 Actn2Q9JI91 894 aa16.82■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms