RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Ccdc174Q3U155 467 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Cep135Q6P5D4 1140 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Zfp251Q6PCX8 632 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ube3cQ80U95 1083 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Tomm22Q9CPQ3 142 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Trip6Q9Z1Y4 480 aa18.51■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Plekhf1Q3TB82 279 aa18.5■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Psrc1Q9D0P7 329 aa18.5■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Grin1P35438 938 aa18.5■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Pcdhb14Q6PB90 796 aa18.5■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Magi2Q9WVQ1 1275 aa18.5■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Dapk3O54784 448 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Znf496Q5SXI5 585 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ttc12Q8BW49 704 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 MbipQ99LQ1 341 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Telo2Q9DC40 840 aaKnown RBP18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ubn2Q80WC1 1314 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 LtkP08923 888 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 L1td1Q587J6 782 aaKnown RBP18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Vps16Q920Q4 839 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Tfcp2Q9ERA0 502 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 CpdO89001 1377 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Med23Q80YQ2 1367 aa18.49■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Naaladl2A0A0N4SUJ3 795 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Pet2A2AHY8 747 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 U2af2P26369 475 aaKnown RBP18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ctdspl2Q8BG15 465 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Kiaa1524Q8BWY9 907 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Bcl11bQ99PV8 884 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 DccP70211 1447 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Znf568E9PYI1 671 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Gm10134F6ZQC6 126 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 IntuQ059U7 942 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ddx27Q921N6 760 aaKnown RBP18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Etnk1Q9D4V0 363 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 WtapQ9ER69 396 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Vnn1Q9Z0K8 512 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Col3a1P08121 1464 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Myh1Q5SX40 1942 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Myo1bP46735 1107 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Prl2c1Q5SVL9 228 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Cyp24a1Q64441 514 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Haus7Q8BKT8 364 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Slc39a11Q8BWY7 342 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Rbm28Q8CGC6 750 aaKnown RBP18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Klc3Q91W40 508 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ccdc94Q9D6J3 314 aa18.48■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Slc1a4O35874 532 aa18.47■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Golgb1E9PVZ8 3238 aa18.47■□□□□ 0.55
Ckap4-201ENSMUST00000053871 MetP16056 1379 aa18.47■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Sept9Q80UG5 583 aa18.47■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Rtn1Q8K0T0 780 aa18.47■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Myl3P09542 204 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ddb1Q3U1J4 1140 aaKnown RBP18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ift122Q6NWV3 1182 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Wdr64Q9D565 1086 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 FliiQ9JJ28 1271 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Ltbp4Q8K4G1 1666 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Grin2dQ03391 1323 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Sirt2Q8VDQ8 389 aa18.46■□□□□ 0.55
Ckap4-201ENSMUST00000053871 Dennd3A2RT67 1274 aa18.46■□□□□ 0.54
Ckap4-201ENSMUST00000053871 TbcaP48428 108 aaKnown RBP18.46■□□□□ 0.54
Ckap4-201ENSMUST00000053871 SfswapQ3USH5 945 aaKnown RBP18.46■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Kcnh3Q9WVJ0 1095 aa18.46■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Myh2G3UW82 1942 aa18.46■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Rgs12Q8CGE9 1381 aa18.46■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Wdr19Q3UGF1 1341 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Casp12O08736 419 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ggt6Q6PDE7 497 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Fbxo2Q80UW2 297 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Clic6Q8BHB9 596 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 1700029H14RikE9PY36 240 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Dynll1P63168 89 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Zc3h12cQ5DTV4 884 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Vps37dQ810I0 261 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Ankrd23Q812A3 306 aa18.45■□□□□ 0.54
Ckap4-201ENSMUST00000053871 PnnO35691 725 aaKnown RBP18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Mapkapk5O54992 473 aa18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Eno4Q8C042 619 aa18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Frat2Q8K025 231 aa18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 CltaO08585 235 aa18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Pex1Q5BL07 1284 aa18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Abtb2Q7TQI7 1024 aa18.44■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Prss40A6H6T1 365 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Pde11aP0C1Q2 933 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 HelbQ6NVF4 1074 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Usp49Q6P9L4 685 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Olfm5Q8BU90 496 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Rbm19Q8R3C6 952 aaKnown RBP18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Kri1Q8VDQ9 704 aaKnown RBP18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Polr2dQ9D7M8 142 aaKnown RBP18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cnpy3Q9DAU1 276 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Samsn1P57725 372 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 C87499Q3UX49 493 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Il17raQ60943 864 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Tubgcp2Q921G8 905 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Lonrf3Q9D4H7 753 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 GabrdP22933 449 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 Cep63Q3UPP8 700 aa18.43■□□□□ 0.54
Ckap4-201ENSMUST00000053871 ErmnQ5EBJ4 281 aa18.43■□□□□ 0.54
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms