RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 4930550L24RikQ99PA7 320 aa15.26■□□□□ 0.03
Vps35-201ENSMUST00000034131 Mrps25Q9D125 171 aaKnown RBP15.26■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ehd4Q9EQP2 541 aa15.26■□□□□ 0.03
Vps35-201ENSMUST00000034131 Pus3Q9JI38 481 aa15.26■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ahdc1Q6PAL7 1594 aaKnown RBP15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 AppP12023 770 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Btbd11Q6GQW0 1109 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Adcy3Q8VHH7 1145 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Trap1Q9CQN1 706 aaKnown RBP15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Cbx6Q9DBY5 414 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Slc5a4aQ9ET37 656 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Stk11Q9WTK7 436 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Chd4Q6PDQ2 1915 aaKnown RBP15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Cdc27A2A6Q5 825 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 MyclP10166 368 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Pola2P33611 600 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Stim1P70302 685 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Hnrnph2P70333 449 aaKnown RBP15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ctdp1Q7TSG2 960 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 IqcgQ80W32 419 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Tmem67Q8BR76 992 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Kcnh3Q9WVJ0 1095 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Akap2O54931 893 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ap1g2O88512 791 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Gngt1Q61012 74 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 SufuQ9Z0P7 484 aa15.25■□□□□ 0.03
Vps35-201ENSMUST00000034131 Emc10Q3TAS6 258 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Acnat2Q8BGG9 420 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Atad2Q8CDM1 1040 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ccng2O08918 344 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Tsr1Q5SWD9 803 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Irf9Q61179 399 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Txndc2Q6P902 515 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 KynuQ9CXF0 464 aa15.24■□□□□ 0.03
Vps35-201ENSMUST00000034131 Wdr17E9Q271 1322 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Q32P12 615 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Znf653Q6YND2 615 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Vipas39Q8BGQ1 491 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Kif2bQ8C0N1 668 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Alg3Q8K2A8 438 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 PdiltQ9DAN1 588 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Pdcd6ipQ9WU78 869 aaKnown RBP15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Pcdhb14Q6PB90 796 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Lrsam1Q80ZI6 727 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Golim4Q8BXA1 655 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Alpk3Q924C5 1678 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Gm29094F6Q785 221 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ccdc150Q8CDI7 1110 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 LgsnQ8CIX8 563 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 MthfsQ9D110 203 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Lztfl1Q9JHQ5 299 aa15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Kiaa0232Q80U59 1396 aaKnown RBP15.23■□□□□ 0.03
Vps35-201ENSMUST00000034131 Nab2Q61127 525 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ccdc39Q9D5Y1 937 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Traf1P39428 409 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Sdc2P43407 202 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Hand2Q61039 217 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Afap1Q80YS6 731 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ift88Q61371 824 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Pde1cQ64338 706 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Enox1Q8BHR2 643 aaKnown RBP15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 AidaQ8C4Q6 305 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Arhgef6Q8K4I3 771 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Anapc4Q91W96 807 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Cep83Q9D5R3 692 aa15.22■□□□□ 0.03
Vps35-201ENSMUST00000034131 Nckap5lQ6GQX2 1323 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Wee1P47810 646 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 NpeppsQ11011 920 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Ppp1r1bQ60829 194 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 HellsQ60848 821 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Cep55Q8BT07 462 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Dydc1Q9D9T0 175 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Parp14Q2EMV9 1817 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Dnm1P39053 867 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Hspd1P63038 573 aaKnown RBP15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Sparcl1P70663 650 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 GpkowQ56A08 488 aa15.21■□□□□ 0.03
Vps35-201ENSMUST00000034131 Usp42B2RQC2 1324 aaKnown RBP15.21■□□□□ 0.02
Vps35-201ENSMUST00000034131 Tcp11l2Q8K1H7 517 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Uap1Q91YN5 522 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 AdarQ99MU3 1178 aaKnown RBP15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 ToporslQ9D2F8 683 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Mrps31Q61733 384 aaKnown RBP15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Dusp9Q7TNL7 452 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Paf1Q8K2T8 535 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Prpf6Q91YR7 941 aaKnown RBP15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Ccdc47Q9D024 483 aaKnown RBP15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Vmn2r23E9PXI5 849 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Nlgn1Q99K10 843 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Ercc6l2Q9JIM3 1537 aa15.2■□□□□ 0.02
Vps35-201ENSMUST00000034131 Krt86P97861 486 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Cep63Q3UPP8 700 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 GckrQ91X44 587 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Gigyf1Q99MR1 1044 aaKnown RBP15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Nwd1A6H603 1563 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Slit2Q9R1B9 1521 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Cyp2d34L7N463 504 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Sox5P35710 763 aa15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Surf6P70279 355 aaKnown RBP15.19■□□□□ 0.02
Vps35-201ENSMUST00000034131 Epha2Q03145 977 aa15.19■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms