RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	RPL23	P62829	140 aa	Known RBP	10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	MRPL32	Q9BYC8	188 aa	Known RBP	10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	LOC389332	A0A1B0GUA5	103 aa		10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	IGHV2-5	P01817	119 aa		10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	PSG1	P11464	419 aa		10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	WFDC3	Q8IUB2	231 aa		10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	C19orf24	Q9BVV8	132 aa		10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	PARD6G	Q9BYG4	376 aa	Predicted RBP	10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	NAGK	Q9UJ70	344 aa		10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	F11R	Q9Y624	299 aa	Known RBP	10.67	□□□□□ -0.7
NRXN1-233	ENST00000630543	NMU	P48645	174 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	SSBP2	P81877	361 aa	Predicted RBP	10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	GOLT1A	Q6ZVE7	132 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543		H3BUX3	64 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	AGA	P20933	346 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	IGHV4-61	A0A0C4DH41	118 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	CTAG1A	P78358	180 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	RHOG	P84095	191 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	ST6GALNAC6	Q969X2	333 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	WDFY3	Q8IZQ1	3526 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	RNF223	E7ERA6	249 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	FAM120AOS	Q5T036	256 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	MINOS1	Q5TGZ0	78 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543	MINOS1-NBL1	R4GNA1	71 aa		10.66	□□□□□ -0.7
NRXN1-233	ENST00000630543		A0A1B0GWJ7	208 aa		10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543	ATP5G2	Q06055	141 aa		10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543	POU2AF1	Q16633	256 aa		10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543	TXNDC17	Q9BRA2	123 aa		10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543	NDFIP1	Q9BT67	221 aa		10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543	IBA57	Q5T440	356 aa	Known RBP	10.65	□□□□□ -0.7
NRXN1-233	ENST00000630543		K7ERU9	68 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	EIF4EBP1	Q13541	118 aa	Predicted RBP	10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	ZNF841	Q6ZN19	808 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	DTX2	Q86UW9	622 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543		Q8N7P7	452 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	SFRP2	Q96HF1	295 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	C14orf144	Q96I85	54 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	SCRT1	Q9BWW7	348 aa		10.65	□□□□□ -0.71
NRXN1-233	ENST00000630543	TFPI2	P48307	235 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	RABAC1	Q9UI14	185 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	UFC1	Q9Y3C8	167 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	NAV3	Q8IVL0	2385 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	IFITM10	A6NMD0	228 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543		P01737	135 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543		P0C879	139 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	CD99	P14209	185 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	ABCA12	Q86UK0	2595 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	IGHV4-30-2	A0A087WSY4	118 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	OR4C46	A6NHA9	309 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543		B4DSR2	109 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	UBE2E1	P51965	193 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	FAM90A2P	Q658T7	463 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	SCGB1D4	Q6XE38	83 aa		10.64	□□□□□ -0.71
NRXN1-233	ENST00000630543	TRAV30	A0A087WSZ9	112 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	PMS2P5	A8MQ11	134 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543		H7C2G1	150 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	IGLV1-47	P01700	117 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	C15orf32	Q32M92	178 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	SPATA45	Q537H7	98 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	ZNF738	Q8NE65	137 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	RNF125	Q96EQ8	232 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	SMIM12	Q96EX1	92 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	TMEM191A	Q9H0A3	160 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	C5orf52	A6NGY3	159 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543		F5H697	171 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543		G3V318	75 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	RPL13A	P40429	203 aa	Known RBP	10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	CDX1	P47902	265 aa	Predicted RBP	10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	HCFC1	P51610	2035 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543		A0A1W2PPR1	153 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	OCC1	Q8TAD7	63 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	RNASE7	Q9H1E1	156 aa	Known RBP	10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	MYO9A	B2RTY4	2548 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	MSMB	P08118	114 aa		10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	HOXB4	P17483	251 aa	Predicted RBP	10.63	□□□□□ -0.71
NRXN1-233	ENST00000630543	WDR73	Q6P4I2	378 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	OR5R1	Q8NH85	324 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	EEF1AKMT3	Q96AZ1	226 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	RNF5	Q99942	180 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	CHRDL1	Q9BU40	450 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	PEX7	O00628	323 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	PSMB2	P49721	201 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	LINC00479	Q96M42	142 aa		10.62	□□□□□ -0.71
NRXN1-233	ENST00000630543	IGLC7	A0M8Q6	106 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	GAGE10	A6NGK3	116 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	HTN1	P15515	57 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	METTL26	Q96S19	204 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543		Q9H3A6	140 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543		M0QZK8	103 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	GGCT	O75223	188 aa	Known RBP	10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	IMMP2L	Q96T52	175 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	CENPE	Q02224	2701 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543		A0A1B0GW64	132 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	COLCA2	A8K830	154 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	ATP6V0E1	O15342	81 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	DLX6	P56179	175 aa		10.61	□□□□□ -0.71
NRXN1-233	ENST00000630543	TM4SF20	Q53R12	229 aa		10.61	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms