RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 FSTL3O95633 263 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 GATA4P43694 442 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 PRNTQ86SH4 94 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 RPP21Q9H633 154 aaKnown RBP12.65□□□□□ -0.38
NPHP4-211ENST00000622020 WNK2Q9Y3S1 2297 aa12.65□□□□□ -0.38
NPHP4-211ENST00000622020 ZFHX2Q9C0A1 2572 aaPredicted RBP12.65□□□□□ -0.38
NPHP4-211ENST00000622020 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 NUDT3O95989 172 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 SUB1P53999 127 aaKnown RBP eCLIP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 LYZP61626 148 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 FAM231DQ6ZW35 169 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 WIPF2Q8TF74 440 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 C7orf69Q9H7B7 122 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 CHEK1O14757 476 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 Q9H3A6 140 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 ASH1LQ9NR48 2969 aaKnown RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
NPHP4-211ENST00000622020 M0R296 226 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 TM4SF5O14894 197 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 CDKN1BP46527 198 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 FBLN7Q53RD9 439 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 S4R3C0 116 aa12.64□□□□□ -0.39
NPHP4-211ENST00000622020 COL8A1P27658 744 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 PERPQ96FX8 193 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 MUC21A0A0G2JKD1 596 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 MUC21A0A140T8X8 626 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 IGLV2-23P01705 113 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 MUC21Q5SSG8 566 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 GOLT1AQ6ZVE7 132 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 TMEM167AQ8TBQ9 72 aa12.63□□□□□ -0.39
NPHP4-211ENST00000622020 MRPS16Q9Y3D3 137 aaKnown RBP12.63□□□□□ -0.39
NPHP4-211ENST00000622020 IGLC7A0M8Q6 106 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 ZADH2Q8N4Q0 377 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 DCHS2Q6V1P9 2916 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 KLF5Q13887 457 aaPredicted RBP12.62□□□□□ -0.39
NPHP4-211ENST00000622020 FAM120AOSQ5T036 256 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 SPTA1P02549 2419 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 A0A1B0GXF2 115 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 A8MWL6 223 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 SYS1-DBNDD2H3BUS1 97 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 FXYD7P58549 80 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 C17orf77Q96MU5 243 aa12.62□□□□□ -0.39
NPHP4-211ENST00000622020 TCRAP04437 139 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 FTH1P19P0C7X4 201 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 MYCNOSP40205 109 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 FOXE3Q13461 319 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 A0A087X0K7 114 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 OR2J3O76001 311 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 TOMM40O96008 361 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 RBP4P02753 201 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 RASL11AQ6T310 242 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 VSTM2AQ8TAG5 236 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
NPHP4-211ENST00000622020 K7EP13 123 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 VMA21Q3ZAQ7 101 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 MUC15Q8N387 334 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 FAM169BQ8N8A8 192 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 NCOR1P1Q9H4R4 102 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 CTSZQ9UBR2 303 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 BSNQ9UPA5 3926 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 TMSB15BA0A087X1C1 80 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 OR2T8A6NH00 312 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 KLK10O43240 276 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 NDUFB3O43676 98 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 TNFRSF1AP19438 455 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 ADIPOQQ15848 244 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 IGFL2Q6UWQ7 119 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 CHRDL1Q9BU40 450 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 ARHGAP32A7KAX9 2087 aa12.6□□□□□ -0.39
NPHP4-211ENST00000622020 C17orf100A8MU93 164 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 LYNX1G3V0Z9 82 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 LYNX1P0DP58 116 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 HTR1DP28221 377 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 ATP5IP56385 69 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-211ENST00000622020 LDLRAD2Q5SZI1 272 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 MLST8Q9BVC4 326 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 LINC00574Q9H8X3 128 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 PSG1P11464 419 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 BSPH1Q075Z2 132 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 TEX36Q5VZQ5 186 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 TEX45Q8NA69 505 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 SRSF12Q8WXF0 261 aaKnown RBP12.59□□□□□ -0.39
NPHP4-211ENST00000622020 IGHV1-69-2A0A0G2JMI3 117 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 LOC389332A0A1B0GUA5 103 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 C5orf17Q8NAS9 161 aa12.59□□□□□ -0.39
NPHP4-211ENST00000622020 IGHV2-70DA0A0C4DH43 119 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 RPL27AP46776 148 aaKnown RBP12.58□□□□□ -0.4
NPHP4-211ENST00000622020 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 THAP8Q8NA92 274 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 ARMS2P0C7Q2 107 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 GP9P14770 177 aa12.58□□□□□ -0.4
NPHP4-211ENST00000622020 COX7A1P24310 79 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms