RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 RNASE7Q9H1E1 156 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 SMDT1Q9H4I9 107 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 PCNX3Q9H6A9 2034 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 IGHV1-69DA0A0B4J2H0 117 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 TMEM250H0YL14 139 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 ATP6V0E1O15342 81 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 NUDT3O95989 172 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 IGHV1-69P01742 117 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 DMRTC2Q8IXT2 367 aaPredicted RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 C18orf15Q96N68 181 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 ASCL2Q99929 193 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 GGTLC1Q9BX51 225 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 MRPL18Q9H0U6 180 aaKnown RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 CA1P00915 261 aaPredicted RBP8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 NMUP48645 174 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 C19orf54Q5BKX5 351 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 CYYR1Q96J86 154 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 IMMP2LQ96T52 175 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 AP5S1Q9NUS5 200 aa8.23□□□□□ -1.09
SMARCA1-205ENST00000617310 IGHV4-30-2A0A087WSY4 118 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 HIST2H2BCQ6DN03 193 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 C1orf122Q6ZSJ8 110 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 HSPB9Q9BQS6 159 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 SEPSECSQ9HD40 501 aaKnown RBP8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 HECTD1Q9ULT8 2610 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 TRIOO75962 3097 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 MED12LQ86YW9 2145 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 A0A1W2PPI3 338 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 OR4C46A6NHA9 309 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 NPIPB5A8MRT5 1133 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 OOSP1A8MZH6 123 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 M0R3E3 92 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 CFHR2P36980 270 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 ASIPP42127 132 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 SRSF9Q13242 221 aaKnown RBP eCLIP8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 OR1N2Q8NGR9 330 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 TPSG1Q9NRR2 321 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 CTSZQ9UBR2 303 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 ZNF256Q9Y2P7 627 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 A0A1B0GWJ7 208 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 TRGC1P0CF51 173 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 PLA2G5P39877 138 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 GATA4P43694 442 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 UBE2E1P51965 193 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 Q8TAT8 98 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 UBE2E2Q96LR5 201 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 SLC25A39Q9BZJ4 359 aaPredicted RBP8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 DSCAMO60469 2012 aa8.22□□□□□ -1.09
SMARCA1-205ENST00000617310 CELSR3Q9NYQ7 3312 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 TRAV8-1A0A0A6YYK1 113 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 IGHV2-70DA0A0C4DH43 119 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 FCN3O75636 299 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 PTPRSQ13332 1948 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 IGF2-ASQ6U949 168 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 LIME1Q9H400 295 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 ZNF257Q9Y2Q1 563 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 ZFHX4Q86UP3 3567 aa8.21□□□□□ -1.09
SMARCA1-205ENST00000617310 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
SMARCA1-205ENST00000617310 EIF4E3Q8N5X7 224 aaKnown RBP8.21□□□□□ -1.1
SMARCA1-205ENST00000617310 LTBP2Q14767 1821 aa8.21□□□□□ -1.1
SMARCA1-205ENST00000617310 ZNF506Q5JVG8 444 aa8.21□□□□□ -1.1
SMARCA1-205ENST00000617310 ASCL4Q6XD76 172 aa8.21□□□□□ -1.1
SMARCA1-205ENST00000617310 F11RQ9Y624 299 aaKnown RBP8.21□□□□□ -1.1
SMARCA1-205ENST00000617310 ZNF134P52741 427 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 FAM110DQ8TAY7 271 aaPredicted RBP8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 KCNS1Q96KK3 526 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 PRSS2P07478 247 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 SRP19P09132 144 aaKnown RBP8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 ACTL10Q5JWF8 245 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 RPP25LQ8N5L8 163 aaKnown RBP8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 ARL6IP6Q8N6S5 226 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 LRTM2Q8N967 370 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 MAP1LC3AQ9H492 121 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 ERVK11-1P61568 191 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM183BQ1AE95 376 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 C17orf58Q2M2W7 97 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 SIGLEC15Q6ZMC9 328 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 REC114Q7Z4M0 266 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 GTSCR1Q86UQ5 136 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 TBL2Q9Y4P3 447 aaKnown RBP8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 RPS20P60866 119 aaKnown RBP8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 HERVK_113P61574 105 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM136Q6ZRR5 245 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 TMEM183AQ8IXX5 376 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 ATOH7Q8N100 152 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 KIR2DL4Q99706 377 aa8.2□□□□□ -1.1
SMARCA1-205ENST00000617310 TRBV6-6A0A0A6YYG2 114 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 ZNF98A6NK75 572 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 MT-ND6P03923 174 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 LMO1P25800 156 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 SRSF3P84103 164 aaKnown RBP8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 MIEN1Q9BRT3 115 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 RHPN1-AS1Q9BWJ2 59 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 PSG8Q9UQ74 426 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 IGHV4-39P01824 125 aa8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 SSBP4Q9BWG4 385 aaPredicted RBP8.19□□□□□ -1.1
SMARCA1-205ENST00000617310 GPR61Q9BZJ8 451 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms