RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 XAGE1AQ9HD64 81 aa1.9□□□□□ -2.11
NEAT1-205ENST00000616315 PRTFDC1Q9NRG1 225 aa1.9□□□□□ -2.11
NEAT1-205ENST00000616315 ABCC3O15438 1527 aa1.9□□□□□ -2.11
NEAT1-205ENST00000616315 CCDC88AQ3V6T2 1871 aa1.9□□□□□ -2.11
NEAT1-205ENST00000616315 FANCMQ8IYD8 2048 aa1.9□□□□□ -2.11
NEAT1-205ENST00000616315 COL5A1P20908 1838 aaPredicted RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 A2ML1A8K2U0 1454 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 SCN10AQ9Y5Y9 1956 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 FER1L6Q2WGJ9 1857 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 TRAV38-1A0A0B4J264 116 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 TRAV26-2A0A0B4J265 109 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 A0A0J9YW62 118 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 SPAARA0A1B0GVQ0 90 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 A0A1B0GW64 132 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 SIGLEC16A6NMB1 481 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 H7C1C5 153 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 I3L521 148 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 CCL25O15444 150 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 OR2H2O95918 312 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 SRP19P09132 144 aaKnown RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 ZNF705DP0CH99 300 aaPredicted RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 CMPK1P30085 196 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 G6PCP35575 357 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 CSN1S1P47710 185 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 COPZ1P61923 177 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 SNRPD2P62316 118 aaKnown RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 LCN6P62502 163 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 PSG9Q00887 426 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 HIST1H1AQ02539 215 aaPredicted RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 ZNF90Q03938 601 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 HES1Q14469 280 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 C12orf74Q32Q52 190 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 GLYATL3Q5SZD4 288 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 PDZD9Q8IXQ8 264 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 ISOC1Q96CN7 298 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 TSPAN32Q96QS1 320 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 LYSMD1Q96S90 227 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 TMEM147Q9BVK8 224 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 RNASE7Q9H1E1 156 aaKnown RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 CXCL16Q9H2A7 254 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 TAF9BQ9HBM6 251 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 SCP2D1Q9UJQ7 156 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 HHLA3Q9XRX5 114 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 LAMTOR2Q9Y2Q5 125 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 MAGI3Q5TCQ9 1506 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 NAIPQ13075 1403 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 PPRC1Q5VV67 1664 aaKnown RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 MYH7BA7E2Y1 1941 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 DENND4CQ5VZ89 1909 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 KIF13AQ9H1H9 1805 aa1.89□□□□□ -2.11
NEAT1-205ENST00000616315 MYH9P35579 1960 aaKnown RBP1.89□□□□□ -2.11
NEAT1-205ENST00000616315 COL24A1Q17RW2 1714 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 KNDC1Q76NI1 1749 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 CDK5RAP2Q96SN8 1893 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 RIMBP3CA6NJZ7 1639 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 RIMBP3BA6NNM3 1639 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 MROH1Q8NDA8 1641 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 RIMBP3Q9UFD9 1639 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 PPLO60437 1756 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 TOPBP1Q92547 1522 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 TRAV30A0A087WSZ9 112 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 TRAV41A0A0B4J266 112 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 C9JAW5 83 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 CREBL2O60519 120 aaPredicted RBP1.88□□□□□ -2.11
NEAT1-205ENST00000616315 PIAS1O75925 651 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 ZNF682O95780 498 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 SMIM17P0DL12 118 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 P0DMU3 169 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 FAM231AP0DMU4 169 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 FAM231CP0DMU5 169 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 FGF7P21781 194 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 EVI2AP22794 236 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 RPS25P62851 125 aaKnown RBP1.88□□□□□ -2.11
NEAT1-205ENST00000616315 RPS28P62857 69 aaKnown RBP1.88□□□□□ -2.11
NEAT1-205ENST00000616315 SELENOWP63302 87 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 RHEBQ15382 184 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 IBA57Q5T440 356 aaKnown RBP1.88□□□□□ -2.11
NEAT1-205ENST00000616315 C20orf196Q8IYI0 205 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 OR8I2Q8N0Y5 310 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 EXOC3-AS1Q8N2X6 119 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 OR11H6Q8NGC7 330 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 MBD3L1Q8WWY6 194 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 TMEM106AQ96A25 262 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 IMMP2LQ96T52 175 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 LXNQ9BS40 222 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 ULBP3Q9BZM4 244 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 PRO2289Q9P1D8 64 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 NAT8BQ9UHF3 227 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 HIGD1AQ9Y241 93 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 MED31Q9Y3C7 131 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 DIP2BQ9P265 1576 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 SPHKAPQ2M3C7 1700 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 ARAP2Q8WZ64 1704 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 DOCK6Q96HP0 2047 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 PREX2Q70Z35 1606 aa1.88□□□□□ -2.11
NEAT1-205ENST00000616315 LAMB4A4D0S4 1761 aa1.87□□□□□ -2.11
NEAT1-205ENST00000616315 KTN1Q86UP2 1357 aaKnown RBP1.87□□□□□ -2.11
NEAT1-205ENST00000616315 ARHGAP5Q13017 1502 aa1.87□□□□□ -2.11
NEAT1-205ENST00000616315 LMTK2Q8IWU2 1503 aa1.87□□□□□ -2.11
NEAT1-205ENST00000616315 CTTNBP2Q8WZ74 1663 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms